RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CCDC107Q8WV48 283 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 PHYHIPQ92561 330 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 ARL11Q969Q4 196 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 MRPS24Q96EL2 167 aaKnown RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 PFDN5Q99471 154 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 NKX3-1Q99801 234 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 MICU1Q9BPX6 476 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 SEC11CQ9BY50 192 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 NPFFR1Q9GZQ6 430 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 ARL6Q9H0F7 186 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 AMBNQ9NP70 447 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 INPP5EQ9NRR6 644 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 TAS2R8Q9NYW2 309 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 MGAT4CQ9UBM8 478 aa5.65□□□□□ -1.5
CKS1B-205ENST00000473344 SLC25A10Q9UBX3 287 aaPredicted RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 CARHSP1Q9Y2V2 147 aaKnown RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 SF3B6Q9Y3B4 125 aaKnown RBP5.65□□□□□ -1.5
CKS1B-205ENST00000473344 NBEAL2Q6ZNJ1 2754 aa5.65□□□□□ -1.51
CKS1B-205ENST00000473344 A0A1W2PPH5 198 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 TVP23AA6NH52 213 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 ANXA2P2A6NMY6 339 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 ZNF878C9JN71 531 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 M0R1W7 72 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 NUPL2O15504 423 aaKnown RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 PRODHO43272 600 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 ANGPTL7O43827 346 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 FBXO24O75426 580 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR2F2O95006 317 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 DIRAS1O95057 198 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OTX1P32242 354 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 PYCR1P32322 319 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 MECP2P51608 486 aaKnown RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 CCR9P51686 369 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 TAS2R60P59551 318 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 PPP1R8Q12972 351 aaKnown RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR2F1Q13607 317 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 ZNF345Q14585 488 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 SEC23BQ15437 767 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 LRRC75BQ2VPJ9 315 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 GFOD2Q3B7J2 385 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 VAX1Q5SQQ9 334 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 STUMQ69YW2 141 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 CD300LDQ6UXZ3 194 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 IL34Q6ZMJ4 242 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 SLC16A9Q7RTY1 509 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 LYG1Q8N1E2 194 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 CYB561A3Q8NBI2 242 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR4F17Q8NGA8 305 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR52L1Q8NGH7 329 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR5D13Q8NGL4 314 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR10K1Q8NGX5 313 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR1S1Q8NH92 325 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 C8orf46Q8TAG6 207 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 CFHR4Q92496 578 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 R3HDM4Q96D70 268 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 SLAMF6Q96DU3 332 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 SEH1LQ96EE3 360 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 REEP6Q96HR9 211 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 TMEM68Q96MH6 324 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 OR4F4Q96R69 305 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 RTL8AQ9BWD3 113 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 JAM3Q9BX67 310 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 C20orf85Q9H1P6 137 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 PLEKHA1Q9HB21 404 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 SEBOXQ9HB31 216 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 C19orf12Q9NSK7 152 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 AURKAIP1Q9NWT8 199 aaPredicted RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 MRPL22Q9NWU5 206 aaKnown RBP5.64□□□□□ -1.51
CKS1B-205ENST00000473344 GFOD1Q9NXC2 390 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 RASL12Q9NYN1 266 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 HAO2Q9NYQ3 351 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 ZNF391Q9UJN7 358 aa5.64□□□□□ -1.51
CKS1B-205ENST00000473344 hCG_1809904A0A1W2PP81 198 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 A0A1W2PPE2 198 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 A0A1W2PR64 198 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 A0A1W2PRV1 198 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 TSTD3H0UI37 97 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.63□□□□□ -1.51
CKS1B-205ENST00000473344 EIF3GO75821 320 aaKnown RBP eCLIP5.63□□□□□ -1.51
CKS1B-205ENST00000473344 GLCEO94923 617 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 CFDP00746 253 aaPredicted RBP5.63□□□□□ -1.51
CKS1B-205ENST00000473344 IFNA17P01571 189 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 MT-ND4LP03901 98 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 SELLP14151 372 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 S100A2P29034 98 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 GABRA2P47869 451 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 CX3CR1P49238 355 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 LGALS4P56470 323 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 GRB2P62993 217 aaKnown RBP5.63□□□□□ -1.51
CKS1B-205ENST00000473344 FAM3AP98173 230 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 PDZK1IP1Q13113 114 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 C10orf91Q5T1B1 145 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 ATPAF1Q5TC12 328 aaPredicted RBP5.63□□□□□ -1.51
CKS1B-205ENST00000473344 GLDNQ6ZMI3 551 aaPredicted RBP5.63□□□□□ -1.51
CKS1B-205ENST00000473344 MOB3CQ70IA8 216 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 WDR86Q86TI4 376 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 C11orf53Q8IXP5 236 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 FAM185AQ8N0U4 392 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 AQP11Q8NBQ7 271 aa5.63□□□□□ -1.51
CKS1B-205ENST00000473344 CSNK2A3Q8NEV1 391 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms