RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 FAM24BQ8N5W8 94 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 TMEM105Q8N8V8 129 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 UBAC2Q8NBM4 344 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 ZNF485Q8NCK3 441 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 ZNRF1Q8ND25 227 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 OR51A2Q8NGJ7 313 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 OR51S1Q8NGJ8 323 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 ZNRF4Q8WWF5 429 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 DNAJC30Q96LL9 226 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 LINC00477Q96M19 166 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 EFCAB11Q9BUY7 163 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 ISG20L2Q9H9L3 353 aaKnown RBP4.8□□□□□ -1.64
RTF1-203ENST00000473214 TAS2R5Q9NYW4 299 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 FBXO7Q9Y3I1 522 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 RBM7Q9Y580 266 aaKnown RBP4.8□□□□□ -1.64
RTF1-203ENST00000473214 SPTBN2O15020 2390 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 LCTP09848 1927 aa4.8□□□□□ -1.64
RTF1-203ENST00000473214 WDR87Q6ZQQ6 2873 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 IGHV1OR21-1A0A087WYE8 117 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 A0A1W2PRE2 83 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 ZNF726A6NNF4 738 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 J3QT63 122 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 K7EQS6 105 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 RAMP2O60895 175 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 REM1O75628 298 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 IGHV4-39P01824 125 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 S100A8P05109 93 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 LIFP15018 202 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 GPX2P18283 190 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 NELFEP18615 380 aaKnown RBP4.79□□□□□ -1.64
RTF1-203ENST00000473214 CXCL2P19875 107 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 PAX6P26367 422 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 LGALS7P47929 136 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 RFX2P48378 723 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 HBG1P69891 147 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 HBG2P69892 147 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 RUNX1Q01196 453 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 AKR1C8PQ5T2L2 129 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 RSBN1Q5VWQ0 802 aaPredicted RBP4.79□□□□□ -1.64
RTF1-203ENST00000473214 SLC18B1Q6NT16 456 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 UGT2A3Q6UWM9 527 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 C6orf120Q7Z4R8 191 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 CHST4Q8NCG5 386 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 OR10G7Q8NGN6 311 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 OR10D3Q8NH80 312 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 SSC4DQ8WTU2 575 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 SRSF12Q8WXF0 261 aaKnown RBP4.79□□□□□ -1.64
RTF1-203ENST00000473214 GHSRQ92847 366 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 BIRC8Q96P09 236 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 ZNF300Q96RE9 604 aaPredicted RBP4.79□□□□□ -1.64
RTF1-203ENST00000473214 MEIS3Q99687 375 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 SULT4A1Q9BR01 284 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 RTBDNQ9BSG5 229 aaPredicted RBP4.79□□□□□ -1.64
RTF1-203ENST00000473214 RIOK2Q9BVS4 552 aaKnown RBP4.79□□□□□ -1.64
RTF1-203ENST00000473214 OR51E2Q9H255 320 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 TMEM100Q9NV29 134 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 CALYQ9NYX4 217 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 VAX2Q9UIW0 290 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 ZNF257Q9Y2Q1 563 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 ORC6Q9Y5N6 252 aa4.79□□□□□ -1.64
RTF1-203ENST00000473214 IGLV5-45A0A087WSX0 123 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 TRBV5-4A0A0C4DH59 114 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 C9orf170A2RU37 121 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 FAM172BPA6NC97 362 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 CYSRT1A8MQ03 144 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 EEF1E1-BLOC1S5C9J1V9 151 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 NPIPB9F8W1W9 429 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 LINC01619G3V211 115 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 FAAHO00519 579 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 EEF1E1O43324 174 aaKnown RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 FGF17O60258 216 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 RDH16O75452 317 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 POP7O75817 140 aaKnown RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 PMS2P2O95744 297 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 C6orf47O95873 294 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 IFNA4P05014 189 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 PFN1P07737 140 aaKnown RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 CSF3P09919 207 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR5G3P0C626 314 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 MYL9P24844 172 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 GLRXP35754 106 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 MYCNOSP40205 109 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 CD200P41217 278 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 GTF2BQ00403 316 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 P2RY6Q15077 328 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 ZNF630Q2M218 657 aaPredicted RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 TMEM255AQ5JRV8 349 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 NANOGP8Q6NSW7 305 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 DGAT2L6Q6ZPD8 337 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 NEGR1Q7Z3B1 354 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 PEX26Q7Z412 305 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 LRRC28Q86X40 367 aaPredicted RBP4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR4D11Q8NGI4 311 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR10G4Q8NGN3 311 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR1N2Q8NGR9 330 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 OR4S2Q8NH73 311 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 LRRC29Q8WV35 223 aa4.78□□□□□ -1.64
RTF1-203ENST00000473214 FGF14Q92915 247 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms