RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 CECR9P0C854 216 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 EWSR1Q01844 656 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBXN11-213ENST00000472155 TCF15Q12870 199 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 OR8G1Q15617 311 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 SRSF7Q16629 238 aaKnown RBP eCLIP12.7□□□□□ -0.38
UBXN11-213ENST00000472155 MSMPQ1L6U9 139 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 ACSF3Q4G176 576 aaPredicted RBP12.7□□□□□ -0.38
UBXN11-213ENST00000472155 CBLN2Q8IUK8 224 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 UBAC2Q8NBM4 344 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 POM121Q96HA1 1249 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 BOD1Q96IK1 185 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 ABHD14AQ9BUJ0 271 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 PLK3Q9H4B4 646 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 GLRX2Q9NS18 164 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 UQCC1Q9NVA1 299 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
UBXN11-213ENST00000472155 AQP7O14520 342 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 IGKV1-39P01597 117 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 GAPDHP04406 335 aaKnown RBP12.69□□□□□ -0.38
UBXN11-213ENST00000472155 IGKV1D-39P04432 117 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 UCP1P25874 307 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 NKX2-1P43699 371 aaPredicted RBP12.69□□□□□ -0.38
UBXN11-213ENST00000472155 NPBWR1P48145 328 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF497Q6ZNH5 498 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 SPACA1Q9HBV2 294 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 TAAR3PQ9P1P4 343 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 TRAPPC2LQ9UL33 140 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 DOCK11Q5JSL3 2073 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 IQCF6A8MYZ5 107 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 H3BP45 60 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 IGKV3-15P01624 115 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 RAC2P15153 192 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 CD80P33681 288 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 P2RY1P47900 373 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 RND3P61587 244 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 TAGLNQ01995 201 aaKnown RBP12.69□□□□□ -0.38
UBXN11-213ENST00000472155 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 CCDC36Q8IYA8 594 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 TMEM217Q8N7C4 229 aa12.69□□□□□ -0.38
UBXN11-213ENST00000472155 F2RP25116 425 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 ETV3LQ6ZN32 361 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 ARV1Q9H2C2 271 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 COX5AP20674 150 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 NFYBP25208 207 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF616Q08AN1 781 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 SPRNQ5BIV9 151 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 INO80CQ6PI98 192 aaPredicted RBP12.68□□□□□ -0.38
UBXN11-213ENST00000472155 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 OR2C3Q8N628 320 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 STARD4Q96DR4 205 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 CABLES2Q9BTV7 478 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 RNF150Q9ULK6 438 aa12.68□□□□□ -0.38
UBXN11-213ENST00000472155 PRSS44E7EML9 344 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF16P17020 682 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-213ENST00000472155 AESQ08117 197 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 MRPL49Q13405 166 aaKnown RBP12.67□□□□□ -0.38
UBXN11-213ENST00000472155 MIDNQ504T8 468 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 LINC00596Q86U02 117 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 OR1L1Q8NH94 360 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 SAT2Q96F10 170 aaPredicted RBP12.67□□□□□ -0.38
UBXN11-213ENST00000472155 PURGQ9UJV8 347 aaKnown RBP12.67□□□□□ -0.38
UBXN11-213ENST00000472155 PRR33A8MZF0 331 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 RNASEK-C17orf49H0YIS7 233 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 CHST1O43916 411 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 HAND1O96004 215 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 CBR1P16152 277 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 PLA2G5P39877 138 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 LINC00205P59089 165 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 GNMTQ14749 295 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 LRP11Q86VZ4 500 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 CMTM1Q8IZ96 169 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 OR10V1Q8NGI7 309 aa12.67□□□□□ -0.38
UBXN11-213ENST00000472155 CUL9Q8IWT3 2517 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 IGHV1-18A0A0C4DH31 117 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 A6NLC8 198 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 HSPA12AO43301 675 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 SPP1P10451 314 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 PAX9P55771 341 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 ZNF146Q15072 292 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 TMEM182Q6ZP80 229 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-213ENST00000472155 GINS3Q9BRX5 216 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 RIMS4Q9H426 269 aaPredicted RBP12.66□□□□□ -0.38
UBXN11-213ENST00000472155 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 GLS2Q9UI32 602 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 KCNS2Q9ULS6 477 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 ZZEF1O43149 2961 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 FAM157AC9JC47 383 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 H0Y980 276 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 PTBP3O95758 552 aaKnown RBP12.66□□□□□ -0.38
UBXN11-213ENST00000472155 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 VDAC1P21796 283 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 CEACAM6P40199 344 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 RUNX1Q01196 453 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 GPR157Q5UAW9 335 aa12.66□□□□□ -0.38
UBXN11-213ENST00000472155 IL34Q6ZMJ4 242 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms