RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 RAB12Q6IQ22 244 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 THNSL2Q86YJ6 484 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 OR8H3Q8N146 312 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 NANOGP1Q8N7R0 232 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 OR10V1Q8NGI7 309 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 OR4K15Q8NH41 348 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 CNBD2Q96M20 576 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 SELENOIQ9C0D9 397 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 GFOD1Q9NXC2 390 aa12.16□□□□□ -0.46
COL1A1-203ENST00000471344 TSSC4Q9Y5U2 329 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-203ENST00000471344 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 ZNF736B4DX44 427 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-203ENST00000471344 PTGES3LE9PB15 166 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 CCRL2O00421 344 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 CRTAPO75718 401 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-203ENST00000471344 CD1AP06126 327 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 MGMTP16455 207 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-203ENST00000471344 GZMHP20718 246 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 ZNF816Q0VGE8 651 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-203ENST00000471344 SYT6Q5T7P8 510 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-203ENST00000471344 SLC16A12Q6ZSM3 486 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 MOB3BQ86TA1 216 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 PRR18Q8N4B5 295 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 OR4X2Q8NGF9 303 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 OR1L1Q8NH94 360 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 Q96M66 194 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 VCX3BQ9H321 246 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 KCNK15Q9H427 330 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 AURKAIP1Q9NWT8 199 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-203ENST00000471344 ETAA1Q9NY74 926 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 PEX16Q9Y5Y5 336 aa12.15□□□□□ -0.46
COL1A1-203ENST00000471344 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 PSMB11A5LHX3 300 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 M0QZK8 103 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 CDK1P06493 297 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 CD33P20138 364 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 ZNF134P52741 427 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 SLC35A2P78381 396 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 GPR176Q14439 515 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 GNMTQ14749 295 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 FOXB2Q5VYV0 432 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 OR10K2Q6IF99 312 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 ETV3LQ6ZN32 361 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 CDH26Q8IXH8 852 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 ZNF439Q8NDP4 499 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 OR52M1Q8NGK5 317 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 RTN4IP1Q8WWV3 396 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-203ENST00000471344 ST6GALNAC6Q969X2 333 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-203ENST00000471344 TRAPPC2LQ9UL33 140 aa12.14□□□□□ -0.47
COL1A1-203ENST00000471344 MCRIP1C9JLW8 97 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 ORC5O43913 435 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 HBZP02008 142 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 PF4P02776 101 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 IRF3Q14653 427 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 GAPTQ8N292 157 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 LINC00311Q8N616 119 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 Q8N6K4 173 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 WFDC9Q8NEX5 89 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 THRSPQ92748 146 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 MRPS24Q96EL2 167 aaKnown RBP12.13□□□□□ -0.47
COL1A1-203ENST00000471344 TMED9Q9BVK6 235 aa12.13□□□□□ -0.47
COL1A1-203ENST00000471344 LSM2Q9Y333 95 aaKnown RBP12.13□□□□□ -0.47
COL1A1-203ENST00000471344 FGF16O43320 207 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 SC5DO75845 299 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
COL1A1-203ENST00000471344 CRHBPP24387 322 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 HSPA13P48723 471 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 EBI3Q14213 229 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 ACSM3Q53FZ2 586 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 CT45A1Q5HYN5 189 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 RNLSQ5VYX0 342 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 SLC25A48Q6ZT89 311 aaKnown RBP12.12□□□□□ -0.47
COL1A1-203ENST00000471344 LRRTM1Q86UE6 522 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 IZUMO1Q8IYV9 350 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 CT45A3Q8NHU0 189 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 MRAPQ8TCY5 172 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 DUSP21Q9H596 190 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 SPACA1Q9HBV2 294 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 GNG12Q9UBI6 72 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 RAB26Q9ULW5 256 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 ERGIC3Q9Y282 383 aa12.12□□□□□ -0.47
COL1A1-203ENST00000471344 DNAH9Q9NYC9 4486 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 NCBP2LA6PVI3 153 aaKnown RBP12.11□□□□□ -0.47
COL1A1-203ENST00000471344 SERPINE3A8MV23 424 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 MPIG6BO95866 241 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 IGHG2P01859 326 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 MAPK3P27361 379 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-203ENST00000471344 MAP2K4P45985 399 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 GPR50Q13585 617 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 UNQ9370/PRO34162Q6UXP9 181 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 LCNL1Q6ZST4 164 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 NKAIN3Q8N8D7 197 aa12.11□□□□□ -0.47
COL1A1-203ENST00000471344 C8orf31Q8N9H6 132 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms