RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 KNTC1P50748 2209 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 EPHA1P21709 976 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 FOXG1P55316 489 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 RUNX1Q01196 453 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 RELQ04864 619 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 MPV17LQ2QL34 196 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 HIKESHIQ53FT3 197 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 CALHM2Q9HA72 323 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 BTBD17A6NE02 478 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 AP4M1O00189 453 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 SYNGR1O43759 233 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 CTXN2P0C2S0 81 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 ZNF154Q13106 437 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 GNPNAT1Q96EK6 184 aaPredicted RBP13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 LINC00470Q9BZP3 86 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 PRO1933Q9H354 126 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 PRDM13Q9H4Q3 707 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 KIAA1456Q9P272 454 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 LIPGQ9Y5X9 500 aa13.49□□□□□ -0.25
TSPAN4-211ENST00000468468 DOCK10Q96BY6 2186 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 A0A1B0GWJ7 208 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 PGLYRP1O75594 196 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 MT-CO3P00414 261 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 MMP9P14780 707 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 NUBP1P53384 320 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 BAXQ07812 192 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 TUSC5Q8IXB3 177 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 OR5D13Q8NGL4 314 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 IGKV3D-15A0A087WSY6 115 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 H3BQ15 152 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 COX5BP10606 129 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 SFTPCP11686 197 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 SPINK2P20155 84 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 APOBEC3DQ96AK3 386 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 HIST1H2AAQ96QV6 131 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 UNKLQ9H9P5 680 aaKnown RBP13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 LRFN1Q9P244 771 aa13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 BOKQ9UMX3 212 aaPredicted RBP13.48□□□□□ -0.25
TSPAN4-211ENST00000468468 ZNF503-AS2A6NEH8 195 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 H0Y980 276 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 NGFP01138 241 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 MAS1LP35410 378 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 SPCS3P61009 180 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 MISP3Q96FF7 219 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 ZNF488Q96MN9 340 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 ZNF552Q9H707 407 aaPredicted RBP13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 TAAR3PQ9P1P4 343 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 TTC28Q96AY4 2481 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 HS3ST1O14792 307 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 IFNA17P01571 189 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 CELA3AP09093 270 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 PAX9P55771 341 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 C20orf204Q6ZNR8 217 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 RAB39BQ96DA2 213 aa13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
TSPAN4-211ENST00000468468 ZNF727A8MUV8 499 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 TMEM164Q5U3C3 297 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 PCSK4Q6UW60 755 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 HEPN1Q6WQI6 88 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 TGIF2LXQ8IUE1 241 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 OR5A2Q8NGI9 324 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 MRPL30Q8TCC3 161 aaKnown RBP13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 RDH5Q92781 318 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 IL22RA2Q969J5 263 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 LURAP1Q96LR2 239 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 YPEL4Q96NS1 127 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 ATP5SQ99766 215 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 RNF115Q9Y4L5 304 aa13.46□□□□□ -0.25
TSPAN4-211ENST00000468468 SCAF4O95104 1147 aaKnown RBP13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 F2RP25116 425 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 TAGLN2P37802 199 aaKnown RBP13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 LHX2P50458 406 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 UBE2KP61086 200 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 IL24Q13007 206 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 ICAM4Q14773 271 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 MUCL1Q96DR8 90 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 HES7Q9BYE0 225 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 OPA3Q9H6K4 179 aa13.46□□□□□ -0.26
TSPAN4-211ENST00000468468 A0A0G2JRQ6 117 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 C3orf80F5H4A9 247 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 H0YL77 283 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 S100GP29377 79 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 HES3Q5TGS1 186 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 SP5Q6BEB4 398 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 OR51H1Q8NH63 302 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 RIMS4Q9H426 269 aaPredicted RBP13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 IL17BQ9UHF5 180 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 CD300LBA8K4G0 201 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 H3BP45 60 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 SYNGR4O95473 234 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 CEACAM1P13688 526 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 RPS10P46783 165 aaKnown RBP13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 TLE4Q04727 773 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 ZNF429Q86V71 674 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 OR2M7Q8NG81 312 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 GPR146Q96CH1 333 aa13.45□□□□□ -0.26
TSPAN4-211ENST00000468468 OR2W1Q9Y3N9 320 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms