RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 PQLC2Q6ZP29 291 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 HIST2H3AQ71DI3 136 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF367Q7RTV3 350 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 MRPL21Q7Z2W9 205 aaKnown RBP4.27□□□□□ -1.73
PTCD3-207ENST00000467273 TMEM219Q86XT9 240 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 SLC26A10Q8NG04 563 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 TCP10LQ8TDR4 215 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 GIPC3Q8TF64 312 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 H1FXQ92522 213 aaKnown RBP4.27□□□□□ -1.73
PTCD3-207ENST00000467273 SLC7A6Q92536 515 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 SGTBQ96EQ0 304 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 HARBI1Q96MB7 349 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 TM2D3Q9BRN9 247 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 OR2S2Q9NQN1 319 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 ENOPH1Q9UHY7 261 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 RNF150Q9ULK6 438 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 SLC7A7Q9UM01 511 aa4.27□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF256Q9Y2P7 627 aaPredicted RBP4.27□□□□□ -1.73
PTCD3-207ENST00000467273 CSDC2Q9Y534 153 aaKnown RBP4.27□□□□□ -1.73
PTCD3-207ENST00000467273 FRAS1Q86XX4 4008 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 RYR1P21817 5038 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 IGHV3OR15-7A0A075B7D8 119 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 A0A1W2PPQ1 181 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 EFCAB10A6NFE3 127 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 SMIM23A6NLE4 172 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 CPSF4LA6NMK7 179 aaKnown RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 M0QZK8 103 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 BHLHE40O14503 412 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ACOT8O14734 319 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 SIGLEC5O15389 551 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 NBR2O15453 112 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PRAF2O60831 178 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 GMNNO75496 209 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 NDUFB4O95168 129 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 RBP4P02753 201 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 SERPINE2P07093 398 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 BPGMP07738 259 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ACSM4P0C7M7 580 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PGA5P0DJD9 388 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 TNFRSF1BP20333 461 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 DDOSTP39656 456 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 MAGEA2P43356 314 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 RASSF2P50749 326 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 DLX1P56177 255 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ADARB1P78563 741 aaKnown RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PRB3Q04118 309 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PJVKQ0ZLH3 352 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 GTDC1Q4AE62 458 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 WDR82Q6UXN9 313 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 CALHM1Q8IU99 346 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 C4orf33Q8N1A6 199 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 OSR2Q8N2R0 312 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 FAM216BQ8N7L0 139 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 NANOGP1Q8N7R0 232 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 NECAP1Q8NC96 275 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 OR6T1Q8NGN1 323 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 OR5M8Q8NGP6 311 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 MPLKIPQ8TAP9 179 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 LRRC29Q8WV35 223 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 RASSF5Q8WWW0 418 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 GGHQ92820 318 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PACRGQ96M98 296 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PRSS27Q9BQR3 290 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 WFDC6Q9BQY6 131 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF251Q9BRH9 671 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ZNF649Q9BS31 505 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 SRRQ9GZT4 340 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 TLNRD1Q9H1K6 362 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 CHMP1AQ9HD42 196 aaPredicted RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 VNN3Q9NY84 501 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 PIPOXQ9P0Z9 390 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 MRM2Q9UI43 246 aaKnown RBP4.26□□□□□ -1.73
PTCD3-207ENST00000467273 ANGPT4Q9Y264 503 aa4.26□□□□□ -1.73
PTCD3-207ENST00000467273 A0A1B0GW55 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 TMEM213A2RRL7 107 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 PRSS37A4D1T9 235 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 ODF3BA8MYP8 253 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 XKRYO14609 159 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 RAB29O14966 203 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 RER1O15258 196 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 SNAI2O43623 268 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L2P0CJ85 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L3P0CJ86 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L4P0CJ87 422 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L5P0CJ88 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L6P0CJ89 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DUX4L7P0CJ90 424 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 ARSBP15848 533 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 NCK1P16333 377 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 CTLA4P16410 223 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 GPX2P18283 190 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 DTYMKP23919 212 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 CEACAM3P40198 252 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 ID1P41134 155 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 OR3A1P47881 315 aa4.25□□□□□ -1.73
PTCD3-207ENST00000467273 CDX1P47902 265 aaPredicted RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 MRPL19P49406 292 aaKnown RBP4.25□□□□□ -1.73
PTCD3-207ENST00000467273 SLC25A1P53007 311 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms