RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
COL4A1-202ENST00000467182 A0A0A6YYJ9 748 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 IGKV1D-13A0A0B4J2D9 117 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 F2RL2O00254 374 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 DHFRP00374 187 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 PPYP01298 95 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 IL5P05113 134 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 IGKV1-13P0DP09 117 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 GZMHP20718 246 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 GPR6P46095 362 aaPredicted RBP10.74□□□□□ -0.69
COL4A1-202ENST00000467182 UCP3P55916 312 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF273Q14593 569 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 SURF2Q15527 256 aaPredicted RBP10.74□□□□□ -0.69
COL4A1-202ENST00000467182 LRRC10Q5BKY1 277 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 GLDNQ6ZMI3 551 aaPredicted RBP10.74□□□□□ -0.69
COL4A1-202ENST00000467182 PRR18Q8N4B5 295 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 ADAD2Q8NCV1 583 aaKnown RBP10.74□□□□□ -0.69
COL4A1-202ENST00000467182 OR52L2PQ8NGH6 319 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 CHAC2Q8WUX2 184 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 ARL11Q969Q4 196 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 TMEM230Q96A57 120 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 TIMD4Q96H15 378 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 BEX2Q9BXY8 128 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 PARP12Q9H0J9 701 aaKnown RBP10.74□□□□□ -0.69
COL4A1-202ENST00000467182 LINC00574Q9H8X3 128 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 BEX1Q9HBH7 125 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 CALYQ9NYX4 217 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 OR6C3Q9NZP0 311 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 MIOXQ9UGB7 285 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 SLC23A1Q9UHI7 598 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 USP9YO00507 2555 aaPredicted RBP10.74□□□□□ -0.69
COL4A1-202ENST00000467182 FBN2P35556 2912 aa10.74□□□□□ -0.69
COL4A1-202ENST00000467182 USF3Q68DE3 2245 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 RPS2P15880 293 aaKnown RBP10.73□□□□□ -0.69
COL4A1-202ENST00000467182 SSTR2P30874 369 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 HTD2P86397 168 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 MEF2CQ06413 473 aaPredicted RBP10.73□□□□□ -0.69
COL4A1-202ENST00000467182 BAMBIQ13145 260 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 GNMTQ14749 295 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 UTF1Q5T230 341 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 TMEM200BQ69YZ2 307 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF787Q6DD87 383 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 HIST2H2BCQ6DN03 193 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 SLC25A42Q86VD7 318 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF565Q8N9K5 539 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 OR10J5Q8NHC4 309 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 RFESDQ8TAC1 157 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 CAPSLQ8WWF8 208 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 IL1F10Q8WWZ1 152 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 GALMQ96C23 342 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 NEIL1Q96FI4 390 aaPredicted RBP10.73□□□□□ -0.69
COL4A1-202ENST00000467182 SEC22CQ9BRL7 303 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 RSRP1Q9BUV0 290 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 PATZ1Q9HBE1 687 aaKnown RBP10.73□□□□□ -0.69
COL4A1-202ENST00000467182 UBE2J1Q9Y385 318 aaPredicted RBP10.73□□□□□ -0.69
COL4A1-202ENST00000467182 LINC00312Q9Y6C7 94 aa10.73□□□□□ -0.69
COL4A1-202ENST00000467182 TRGV10A0A0A0MS01 117 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 KBTBD11-OT1A0A1B0GTJ5 212 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 hADV38S2A0JD32 116 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF729A6NN14 1252 aaPredicted RBP10.72□□□□□ -0.69
COL4A1-202ENST00000467182 SPINT2O43291 252 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 PRAF2O60831 178 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 RLN1P04808 185 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 CTSDP07339 412 aaPredicted RBP10.72□□□□□ -0.69
COL4A1-202ENST00000467182 PI3P19957 117 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 ECI1P42126 302 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 DLX6P56179 175 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 LOXL3P58215 753 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 FXYD4P59646 89 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 DHODHQ02127 395 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 CARTPTQ16568 116 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 WDR25Q64LD2 544 aaPredicted RBP10.72□□□□□ -0.69
COL4A1-202ENST00000467182 TMED4Q7Z7H5 227 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 SPICQ8N5J4 248 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 OR52B4Q8NGK2 314 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 MARVELD3Q96A59 401 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 RDH8Q9NYR8 311 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 TAS2R3Q9NYW6 316 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 CLN8Q9UBY8 286 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF69Q9UC07 566 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 OR2W1Q9Y3N9 320 aa10.72□□□□□ -0.69
COL4A1-202ENST00000467182 IGHV3-43A0A0B4J1X8 118 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 VWC2LB2RUY7 222 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 MMP23AO75900 390 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 OR4E1P0C645 316 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 IGHV3-43DP0DP04 118 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 ZBTB25P24278 435 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 GNRHRP30968 328 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 IL2RGP31785 369 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 CEACAM6P40199 344 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 PDLIM4P50479 330 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 RPL31P62899 125 aaKnown RBP10.71□□□□□ -0.69
COL4A1-202ENST00000467182 ZNF626Q68DY1 528 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 OR8B3Q8NGG8 313 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 C8orf46Q8TAG6 207 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 H1FXQ92522 213 aaKnown RBP10.71□□□□□ -0.69
COL4A1-202ENST00000467182 TOMM40LQ969M1 308 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 SCGB3A2Q96PL1 93 aa10.71□□□□□ -0.69
COL4A1-202ENST00000467182 OR8B2Q96RD0 313 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms