RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 OR5M8Q8NGP6 311 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 OR2T10Q8NGZ9 312 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 UBALD1Q8TB05 177 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 RGP1Q92546 391 aaPredicted RBP7.6□□□□□ -1.19
USP39-212ENST00000465514 ARL11Q969Q4 196 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 ABCG5Q9H222 651 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 IFT22Q9H7X7 185 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 DCLRE1BQ9H816 532 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 AMBNQ9NP70 447 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 TAS2R4Q9NYW5 299 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 ST3GAL6Q9Y274 331 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 GMPPBQ9Y5P6 360 aa7.6□□□□□ -1.19
USP39-212ENST00000465514 TMEM30CPA0ZSE6 113 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 C15orf65H3BRN8 121 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 SDCBPO00560 298 aaPredicted RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 MPZL2O60487 215 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 OR7C1O76099 320 aaPredicted RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 GTF2A1P52655 376 aaPredicted RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 RBM11P57052 281 aaKnown RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 RAB40BQ12829 278 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 FOXE3Q13461 319 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 GPR50Q13585 617 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 KIR2DS1Q14954 304 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 CXorf66Q5JRM2 361 aaPredicted RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 NHLRC3Q5JS37 347 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 FAM53AQ6NSI3 398 aaPredicted RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 IZUMO1Q8IYV9 350 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 CBR4Q8N4T8 237 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 LINC00311Q8N616 119 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 OR52M1Q8NGK5 317 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 OR52I1Q8NGK6 324 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 OR8U1Q8NH10 309 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 OR52N1Q8NH53 320 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 RHOXF1Q8NHV9 184 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 CCDC107Q8WV48 283 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 RTN4IP1Q8WWV3 396 aaPredicted RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 LINC00476Q8WZB0 136 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 Q96MT0 163 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 JAM3Q9BX67 310 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 GON7Q9BXV9 100 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 METTL9Q9H1A3 318 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 PLSCR3Q9NRY6 295 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 LIN7CQ9NUP9 197 aaKnown RBP7.59□□□□□ -1.19
USP39-212ENST00000465514 FAM53CQ9NYF3 392 aa7.59□□□□□ -1.19
USP39-212ENST00000465514 IGHV3-43A0A0B4J1X8 118 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 ZNF736B4DX44 427 aaPredicted RBP7.58□□□□□ -1.2
USP39-212ENST00000465514 H3BNX3 289 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 GEMIN2O14893 280 aaKnown RBP7.58□□□□□ -1.2
USP39-212ENST00000465514 ORC5O43913 435 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 MOSP00540 346 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 CSTBP04080 98 aaKnown RBP7.58□□□□□ -1.2
USP39-212ENST00000465514 CD2P06729 351 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 LIMS3P0CW19 117 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 LIMS4P0CW20 117 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 IGHV3-43DP0DP04 118 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 CD1BP29016 333 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 CDX1P47902 265 aaPredicted RBP7.58□□□□□ -1.2
USP39-212ENST00000465514 ZNF260Q3ZCT1 412 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 ATAD3CQ5T2N8 411 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 RNF152Q8N8N0 203 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 C8orf31Q8N9H6 132 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 TMEM104Q8NE00 496 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 GPR148Q8TDV2 347 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 ST6GALNAC6Q969X2 333 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 TMEM106AQ96A25 262 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 S1PR3Q99500 378 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 RASL11BQ9BPW5 248 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 TMEM138Q9NPI0 162 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 GFOD1Q9NXC2 390 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 IL36GQ9NZH8 169 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
USP39-212ENST00000465514 SLC31A2O15432 143 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 RRP9O43818 475 aaKnown RBP7.57□□□□□ -1.2
USP39-212ENST00000465514 MT-ND4P03905 459 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 ELANEP08246 267 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 SERPINA2P20848 420 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 IL3RAP26951 378 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 ZNF93P35789 620 aaPredicted RBP7.57□□□□□ -1.2
USP39-212ENST00000465514 F2RL1P55085 397 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 PPP3R1P63098 170 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 CFHR3Q02985 330 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 LCE2CQ5TA81 110 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 DDI2Q5TDH0 399 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 XAF1Q6GPH4 301 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 RPL22L1Q6P5R6 122 aaKnown RBP7.57□□□□□ -1.2
USP39-212ENST00000465514 ZNF497Q6ZNH5 498 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 LINC00596Q86U02 117 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 NEK7Q8TDX7 302 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 ORAI1Q96D31 301 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 S100A13Q99584 98 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 HSPB9Q9BQS6 159 aa7.57□□□□□ -1.2
USP39-212ENST00000465514 MRPS18AQ9NVS2 196 aaKnown RBP7.57□□□□□ -1.2
USP39-212ENST00000465514 PAK1IP1Q9NWT1 392 aaPredicted RBP7.57□□□□□ -1.2
USP39-212ENST00000465514 RPL36Q9Y3U8 105 aaKnown RBP7.57□□□□□ -1.2
USP39-212ENST00000465514 TNCP24821 2201 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 A0A1W2PP11 408 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 AIPO00170 330 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 LDLRAD4O15165 306 aa7.56□□□□□ -1.2
USP39-212ENST00000465514 SLC25A17O43808 307 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms