RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 ZNF837Q96EG3 531 aaPredicted RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 TMEM68Q96MH6 324 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 PCED1AQ9H1Q7 454 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 RIMS4Q9H426 269 aaPredicted RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 VSIRQ9H7M9 311 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 PPP1R14DQ9NXH3 145 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 ATP23Q9Y6H3 246 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 TRBV6-6A0A0A6YYG2 114 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 IGHV3-15A0A0B4J1V0 119 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 IGKV1-6A0A0C4DH72 117 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 CCDC163A0A0D9SF12 145 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 A0A0G2JRQ6 117 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 A0A1B0GWJ7 208 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 EREGO14944 169 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 GGCTO75223 188 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 ZNF737O75373 536 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 LIFP15018 202 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 ZNF32P17041 273 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 MDKP21741 143 aaPredicted RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 SRP14P37108 136 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 GALR1P47211 349 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 DSCR4P56555 118 aaPredicted RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 PCBD1P61457 104 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 RPL23P62829 140 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 MEF2BQ02080 365 aaPredicted RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 SHHQ15465 462 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 PRAMEF20Q5VT98 475 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 MRPL52Q86TS9 123 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 CISD2Q8N5K1 135 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 NAXEQ8NCW5 288 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 TSTD1Q8NFU3 115 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 PIGCQ92535 297 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 ANAPC16Q96DE5 110 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 STRADBQ9C0K7 418 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 OR2H1Q9GZK4 316 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
USP48-206ENST00000464577 WNT5BQ9H1J7 359 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 RBKSQ9H477 322 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 RALGAPA1Q6GYQ0 2036 aa6.24□□□□□ -1.41
USP48-206ENST00000464577 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 GJE1A6NN92 205 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 B4E171 279 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 H3BP45 60 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 SLC33A1O00400 549 aaPredicted RBP6.23□□□□□ -1.41
USP48-206ENST00000464577 SYNGR2O43760 224 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 CYTIPO60759 359 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 NXPH3O95157 252 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 SERPINE2P07093 398 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 CD55P08174 381 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 HOXA6P31267 233 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 APLNRP35414 380 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 TSPAN7P41732 249 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 FGF8P55075 233 aaPredicted RBP6.23□□□□□ -1.41
USP48-206ENST00000464577 RAC1P63000 192 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 PSG4Q00888 419 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 ARL16Q0P5N6 197 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 P2RY6Q15077 328 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 RAET1LQ5VY80 246 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 MYO7BQ6PIF6 2116 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 FBXO46Q6PJ61 603 aaPredicted RBP6.23□□□□□ -1.41
USP48-206ENST00000464577 ZNF66Q6ZN08 573 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 LINC00596Q86U02 117 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 HAPLN4Q86UW8 402 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 DEFB119Q8N690 84 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 IER2Q9BTL4 223 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 PSENENQ9NZ42 101 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 WASF3Q9UPY6 502 aa6.23□□□□□ -1.41
USP48-206ENST00000464577 LAMA2P24043 3122 aaKnown RBP6.23□□□□□ -1.41
USP48-206ENST00000464577 KIR2DL5BA0A0G2JN68 375 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 KIR2DL5BA0A0G2JPC4 375 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 A0A0J9YW62 118 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 ZNF705GA8MUZ8 300 aaPredicted RBP6.22□□□□□ -1.41
USP48-206ENST00000464577 NPIPB11E5RHQ5 1161 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 TNFSF11O14788 317 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 ZIC3O60481 467 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 VENTXO95231 258 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 EDN3P14138 238 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 RAB4AP20338 218 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 GZMHP20718 246 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 BCL3P20749 454 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PRSS12P56730 875 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 TNFRSF9Q07011 255 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 ZNF324BQ6AW86 544 aaPredicted RBP6.22□□□□□ -1.41
USP48-206ENST00000464577 PCSK4Q6UW60 755 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 KIR2DL5AQ8N109 375 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 CADM4Q8NFZ8 388 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 TAF15Q92804 592 aaKnown RBP eCLIP6.22□□□□□ -1.41
USP48-206ENST00000464577 LHX4Q969G2 390 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 BTF3L4Q96K17 158 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 GPHA2Q96T91 129 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 C1QTNF5Q9BXJ0 243 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 SRXN1Q9BYN0 137 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PRDM14Q9GZV8 571 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 OR51I2Q9H344 312 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 PLK3Q9H4B4 646 aa6.22□□□□□ -1.41
USP48-206ENST00000464577 MANBALQ9NQG1 85 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms