RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 NUDT22Q9BRQ3 303 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 TMEM204Q9BSN7 226 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 TMEM147Q9BVK8 224 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 KCNIP2Q9NS61 270 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 TMEM74BQ9NUR3 256 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 MRPS16Q9Y3D3 137 aaKnown RBP3.35□□□□□ -1.87
CCNL1-204ENST00000464316 IGKV1D-8A0A087WSZ0 117 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 IGKV1-9A0A0C4DH69 117 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 LOC102725191A0A1B0GVB3 256 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A10PA6NDY2 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A18PA6NE21 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A16PA6NEW6 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A20PA6NIJ5 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A8PA6NJQ4 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A7PA6NKC0 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A22PA8MWA6 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A12PA8MX19 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A5PA8MXJ8 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A23PA8MXZ1 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A26D6RGX4 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 PAGE4O60829 102 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 CLDN1O95832 211 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A15PP0C7V4 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A13PP0C7W8 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A14PP0C7W9 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FAM90A24PP0C7X0 464 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 WNT5AP41221 380 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 TFPI2P48307 235 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 CARD18P57730 90 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 TMEM267Q0VDI3 215 aaPredicted RBP3.35□□□□□ -1.87
CCNL1-204ENST00000464316 TRA2AQ13595 282 aaKnown RBP eCLIP3.35□□□□□ -1.877e-12■■□□□ 14.4
CCNL1-204ENST00000464316 RUNX3Q13761 415 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 MMDQ15546 238 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FBLN7Q53RD9 439 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 C9orf50Q5SZB4 431 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 BRICD5Q6PL45 260 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 C1QL2Q7Z5L3 287 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 C1orf174Q8IYL3 243 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 FLVCR1-AS1Q8TAF5 88 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 IFI44Q8TCB0 444 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 LSM10Q969L4 123 aaKnown RBP3.35□□□□□ -1.87
CCNL1-204ENST00000464316 WDR61Q9GZS3 305 aaKnown RBP3.35□□□□□ -1.87
CCNL1-204ENST00000464316 SLC7A10Q9NS82 523 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 KLRF1Q9NZS2 232 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 CHTOPQ9Y3Y2 248 aaKnown RBP3.35□□□□□ -1.87
CCNL1-204ENST00000464316 LHFPL6Q9Y693 200 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 SCN2AQ99250 2005 aa3.35□□□□□ -1.87
CCNL1-204ENST00000464316 LIPT2A6NK58 231 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 NPIPA2E9PIF3 369 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ETV2O00321 342 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ANGPTL7O43827 346 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 NXPH2O95156 264 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 VAMP5O95183 116 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 F2RP25116 425 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 NTSR1P30989 418 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 THBS3P49746 956 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 YPEL3P61236 119 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 GNB2P62879 340 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 MKXQ8IYA7 352 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 GAPTQ8N292 157 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 TMEM256Q8N2U0 113 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 D2HGDHQ8N465 521 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ZNF596Q8TC21 504 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 OR4C12Q96R67 309 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 FAM103A1Q9BTL3 118 aaKnown RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 LIN7CQ9NUP9 197 aaKnown RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 OBP2AQ9NY56 170 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 COX11Q9Y6N1 276 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 UBE2L5PA0A1B0GUS4 154 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 DPRXA6NFQ7 191 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 FOXI3A8MTJ6 420 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 NPIPA3F8WFD2 350 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 SIRPB1O00241 398 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 TSPAN2O60636 221 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ZNF16P17020 682 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 GZMHP20718 246 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 CTGFP29279 349 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 CDC34P49427 236 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ARF6P62330 175 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 Q0VG73 95 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 SMAD4Q13485 552 aaKnown RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 SRSF7Q16629 238 aaKnown RBP eCLIP3.34□□□□□ -1.871e-9■□□□□ 10.7
CCNL1-204ENST00000464316 NMSQ5H8A3 153 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 FFAR4Q5NUL3 377 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 SLC25A47Q6Q0C1 308 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 C12orf54Q6X4T0 127 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 LINC01551Q86U37 167 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 LSRQ86X29 649 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 METTL27Q8N6F8 245 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ZNF525Q8N782 197 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 SFRP2Q96HF1 295 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 MRGPRX1Q96LB2 322 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 RBM24Q9BX46 236 aaKnown RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 MRPL18Q9H0U6 180 aaKnown RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 MTIF3Q9H2K0 278 aaKnown RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 ZNF703Q9H7S9 590 aaPredicted RBP3.34□□□□□ -1.87
CCNL1-204ENST00000464316 SLC25A22Q9H936 323 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 CACNG5Q9UF02 275 aa3.34□□□□□ -1.87
CCNL1-204ENST00000464316 NAT8BQ9UHF3 227 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms