RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ATP5J2P56134 94 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 PIGYQ3MUY2 71 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 MFSD4AQ8N468 514 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 BOLLQ8N9W6 283 aaKnown RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 OR4K15Q8NH41 348 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 SAT2Q96F10 170 aaPredicted RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 DIRAS2Q96HU8 199 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 MICU1Q9BPX6 476 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 RTL8AQ9BWD3 113 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 ABRACLQ9P1F3 81 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 ZDHHC8Q9ULC8 765 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 LAMP3Q9UQV4 416 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 ISPDA4D126 451 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 LYNX1G3V0Z9 82 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 I3L521 148 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 M0R233 179 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 CDC14BO60729 498 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 OR2C1O95371 312 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 LYNX1P0DP58 116 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 HLA-DMAP28067 261 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 CDKN1AP38936 164 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 DAZAP2Q15038 168 aaPredicted RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 PSG3Q16557 428 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 LINC00299Q6ZSB3 139 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 SLC16A13Q7RTY0 426 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 C1orf174Q8IYL3 243 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 PNLDC1Q8NA58 520 aaKnown RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 AQP3Q92482 292 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 RCC1LQ96I51 464 aaKnown RBP8.69□□□□□ -1.02
USP39-210ENST00000459775 CXXC4Q9H2H0 198 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 LIME1Q9H400 295 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 C1orf123Q9NWV4 160 aa8.69□□□□□ -1.02
USP39-210ENST00000459775 OTOGQ6ZRI0 2925 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 A0A1B0GV72 72 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 OR5B21A6NL26 309 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 C17orf100A8MU93 164 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 SULT1C2O00338 296 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 EVX1P49640 407 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 TNFAIP6P98066 277 aaPredicted RBP8.68□□□□□ -1.02
USP39-210ENST00000459775 RSU1Q15404 277 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 CDPF1Q6NVV7 123 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 FBXL14Q8N1E6 418 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 OR4M2Q8NGB6 313 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 SNAPC3Q92966 411 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 SELENOIQ9C0D9 397 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 MAGT1Q9H0U3 335 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 ATG5Q9H1Y0 275 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 DYNLRB1Q9NP97 96 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 AKIP1Q9NQ31 210 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 TMEM14DPA8MWL7 114 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 SOCS1O15524 211 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 NDUFS7O75251 213 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 LY86O95711 162 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 HPXP02790 462 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 MGMTP16455 207 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 EGR1P18146 543 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 ZP3P21754 424 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 CDK2P24941 298 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 CFPP27918 469 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 ART1P52961 327 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 ZNF79Q15937 498 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 TAF9Q16594 264 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 RSBN1Q5VWQ0 802 aaPredicted RBP8.68□□□□□ -1.02
USP39-210ENST00000459775 OLFML2AQ68BL7 652 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 WDR82Q6UXN9 313 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 LYG2Q86SG7 212 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 CCDC190Q86UF4 302 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 ACOT12Q8WYK0 555 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
USP39-210ENST00000459775 TECTBQ96PL2 329 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 S100A13Q99584 98 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 LPAR5Q9H1C0 372 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 COPZ2Q9P299 210 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 PEX16Q9Y5Y5 336 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 A3GALT2U3KPV4 340 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 V9GYH0 126 aa8.68□□□□□ -1.02
USP39-210ENST00000459775 MAP1AP78559 2803 aaPredicted RBP8.67□□□□□ -1.02
USP39-210ENST00000459775 IGHV3OR15-7A0A075B7D8 119 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 LRP5LA4QPB2 252 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 GEMIN2O14893 280 aaKnown RBP8.67□□□□□ -1.02
USP39-210ENST00000459775 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
USP39-210ENST00000459775 DANCRP0C864 163 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 GABRR1P24046 479 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 GPR12P47775 334 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 HERV-K104P63124 156 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 SFRP4Q6FHJ7 346 aaPredicted RBP8.67□□□□□ -1.02
USP39-210ENST00000459775 ZNF295-AS1Q8N0V1 137 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 TMEM56Q96MV1 263 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 CLEC4MQ9H2X3 399 aaPredicted RBP8.67□□□□□ -1.02
USP39-210ENST00000459775 GCM1Q9NP62 436 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 CYSLTR2Q9NS75 346 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 TMEM56-RWDD3S4R434 201 aa8.67□□□□□ -1.02
USP39-210ENST00000459775 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.66□□□□□ -1.02
USP39-210ENST00000459775 MPTX1A8MV57 137 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 TRDCB7Z8K6 153 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 TEX46H3BTG2 121 aa8.66□□□□□ -1.02
USP39-210ENST00000459775 J3QT63 122 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms