RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SLC16A11Q8NCK7 471 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MRPL37Q9BZE1 423 aaKnown RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 HES3Q5TGS1 186 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 OR8B3Q8NGG8 313 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 RPEQ96AT9 228 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 KCNMB2Q9Y691 235 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 M0R3E3 92 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 PTGESO14684 152 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 AMY1AP04745 511 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 RAB32Q13637 225 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 DMKNQ6E0U4 476 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 RNASEKQ6P5S7 137 aaKnown RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 BEND2Q8NDZ0 799 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 MEGF10Q96KG7 1140 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ZBP1Q9H171 429 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 DUSP13Q9UII6 198 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 P2RY2P41231 377 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 GLIPR1P48060 266 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ROM1Q03395 351 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM109BQ6ICB4 259 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 FAM90A1Q86YD7 464 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ADAMTS17Q8TE56 1095 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 ADAT3Q96EY9 351 aaPredicted RBP4.62□□□□□ -1.67
CSMD3-204ENST00000455883 SARGQ9BW04 601 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 HAPLN2Q9GZV7 340 aa4.62□□□□□ -1.67
CSMD3-204ENST00000455883 TNS1Q9HBL0 1735 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF860A6NHJ4 632 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TAS2R60P59551 318 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 PPP1R1AQ13522 171 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 LEXMQ3ZCV2 418 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 GDF6Q6KF10 455 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 OR1P1Q8NH06 330 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CACNG8Q8WXS5 425 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 OR51B4Q9Y5P0 310 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TRAV38-1A0A0B4J264 116 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 H3BQ15 152 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 WNT9BO14905 357 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ARG1P05089 322 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 PRSS56P0CW18 603 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 HMGA1P17096 107 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 PLPPR1Q8TBJ4 325 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 RARRES2Q99969 163 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TRAV17A0A0B4J275 112 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CCDC163A0A0D9SF12 145 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 FEZF1A0PJY2 475 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ZC3H12DA2A288 527 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 H3BQ85 93 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 EPPINO95925 133 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TSPAN7P41732 249 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 KLF9Q13886 244 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CD200R1LQ6Q8B3 271 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CLEC18BQ6UXF7 455 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 GATSQ8NAP1 163 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 YAE1D1Q9NRH1 226 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 PTGDR2Q9Y5Y4 395 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SMIM30A4D0T7 59 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF785A8K8V0 405 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 P2RY6Q15077 328 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 PROCRQ9UNN8 238 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 BRWD3Q6RI45 1802 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ADAMTS20P59510 1910 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ADM5C9JUS6 153 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 LEPROTL1O95214 131 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 F13BP05160 661 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 DANCRP0C864 163 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SPNP16150 400 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CCL23P55773 120 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 NIT1Q86X76 327 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 BCORP1Q8N888 145 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ELSPBP1Q96BH3 223 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 C2orf88Q9BSF0 95 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 NPVFQ9HCQ7 196 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 THAP10Q9P2Z0 257 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SFTPCP11686 197 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 KLF3P57682 345 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 BEX5Q5H9J7 111 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 H3BRM9 83 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CD70P32970 193 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 HTR6P50406 440 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 MEF2CQ06413 473 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 RBPMS2Q6ZRY4 209 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 MRPL38Q96DV4 380 aaKnown RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 OR5V1Q9UGF6 321 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 CLEC2DQ9UHP7 191 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TRAV1-1A0A0B4J248 108 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 HS3ST1O14792 307 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 GPR37O15354 613 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 HPRT1P00492 218 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 MPZP25189 248 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 SEC13P55735 322 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 ZNF658BQ4V348 819 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-204ENST00000455883 LCN15Q6UWW0 184 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 HOGA1Q86XE5 327 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 FAM181AQ8N9Y4 354 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 GATAD1Q8WUU5 269 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 TMEM222Q9H0R3 208 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 MS4A5Q9H3V2 200 aa4.61□□□□□ -1.67
CSMD3-204ENST00000455883 LPAR2Q9HBW0 351 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms