RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 OLFML2AQ68BL7 652 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 BAIAP2L2Q6UXY1 529 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 C8orf31Q8N9H6 132 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 LHX4Q969G2 390 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 C6orf62Q9GZU0 229 aaPredicted RBP11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 ZMAT3Q9HA38 289 aaKnown RBP11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 ARHGAP32A7KAX9 2087 aa11.69□□□□□ -0.54
HMGXB4-204ENST00000455359 ANK3Q12955 4377 aaKnown RBP11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 TRAV39A0A0B4J263 110 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 TMEM235A6NFC5 223 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 TRDCB7Z8K6 153 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 CTDSP2O14595 271 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 HBZP02008 142 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 FCGR3AP08637 254 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 FAM157CP0CG43 387 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 IGHV4-38-2P0DP08 117 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 TAS2R20P59543 309 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 LY6G6FQ5SQ64 297 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 ZNF782Q6ZMW2 699 aaPredicted RBP11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 RFESDQ8TAC1 157 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 GALMQ96C23 342 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 HDHD3Q9BSH5 251 aaPredicted RBP11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 CLEC7AQ9BXN2 247 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 MIXL1Q9H2W2 232 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 JPT1Q9UK76 154 aa11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 SETD2Q9BYW2 2564 aaPredicted RBP11.68□□□□□ -0.54
HMGXB4-204ENST00000455359 NIPBLQ6KC79 2804 aaeCLIP11.67□□□□□ -0.545e-6■□□□□ 10.2
HMGXB4-204ENST00000455359 IGHV2-26A0A0B4J1V2 119 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 SULT1C2O00338 296 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 MMP23AO75900 390 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 RGS11O94810 467 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 PRSS3P35030 304 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 PRRX1P54821 245 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 HLA-DRB3P79483 266 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 ZNF626Q68DY1 528 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 ABHD12Q8N2K0 398 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 OR4A4PQ8NGN8 299 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 OR9G1Q8NH87 305 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 SETD6Q8TBK2 473 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 ZNF596Q8TC21 504 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 OCSTAMPQ9BR26 566 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 SUCNR1Q9BXA5 334 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 ZNF286AQ9HBT8 521 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 GFOD1Q9NXC2 390 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 EXTL2Q9UBQ6 330 aa11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 TBL2Q9Y4P3 447 aaKnown RBP11.67□□□□□ -0.54
HMGXB4-204ENST00000455359 ODF3BA8MYP8 253 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 SDCBPO00560 298 aaPredicted RBP11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 TOR1AO14656 332 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 NPFFO15130 113 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 FABP7O15540 132 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 HLA-DQB1P01920 261 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 EPHA1P21709 976 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 OMGP23515 440 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 NFYBP25208 207 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 S100A5P33763 92 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 LOXL3P58215 753 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 MRPS10P82664 201 aaKnown RBP11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 MINOS1Q5TGZ0 78 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 Q6ZPA2 131 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 LAX1Q8IWV1 398 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 PNKDQ8N490 385 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 BEND2Q8NDZ0 799 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 OR1L1Q8NH94 360 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 NUDCD2Q8WVJ2 157 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 DIRAS2Q96HU8 199 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 CYYR1Q96J86 154 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 MINOS1-NBL1R4GNA1 71 aa11.66□□□□□ -0.54
HMGXB4-204ENST00000455359 SSX5O60225 188 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 LPLP06858 475 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 COX7A1P24310 79 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 GDNFP39905 211 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 LGALS4P56470 323 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 CNIH2Q6PI25 160 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 IL17RELQ6ZVW7 336 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 HOGA1Q86XE5 327 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 LURAP1LQ8IV03 231 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 IZUMO1Q8IYV9 350 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 LINC00311Q8N616 119 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 FAM216AQ8WUB2 273 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 OR2S2Q9NQN1 319 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 ZNF69Q9UC07 566 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 MRPS7Q9Y2R9 242 aaKnown RBP11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 JMJD1CQ15652 2540 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 SVEP1Q4LDE5 3571 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 MXRA5Q9NR99 2828 aa11.65□□□□□ -0.54
HMGXB4-204ENST00000455359 ITGB1BP1O14713 200 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 YPEL1O60688 119 aa11.64□□□□□ -0.55
HMGXB4-204ENST00000455359 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms