RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CEPT1Q9Y6K0 416 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 A0A0B4J203 849 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 CENPVL3A0A0U1RRI6 287 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 UBE2QL1A1L167 161 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 CCDC160A6NGH7 325 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 H3BMQ9 156 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 MFNGO00587 321 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 DIRAS3O95661 229 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 PAHP00439 452 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 CD34P28906 385 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 EFNB2P52799 333 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 TMEM50BP56557 158 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 KLF17Q5JT82 389 aaPredicted RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 C11orf42Q8N5U0 333 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 SAMD12Q8N8I0 201 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 C8orf31Q8N9H6 132 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 OR11H6Q8NGC7 330 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 OR13A1Q8NGR1 328 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 NDNFQ8TB73 568 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF596Q8TC21 504 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 MRPL30Q8TCC3 161 aaKnown RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 C15orf40Q8WUR7 153 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 LHX4Q969G2 390 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 CMSS1Q9BQ75 279 aaKnown RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 FAAP24Q9BTP7 215 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 SUCNR1Q9BXA5 334 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 MS4A7Q9GZW8 240 aaPredicted RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 TMEM133Q9H2Q1 129 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 CHMP1AQ9HD42 196 aaPredicted RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 SIRT7Q9NRC8 400 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 IDI2-AS1Q9NZ38 188 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 RABL2AQ9UBK7 228 aaPredicted RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 RSL24D1Q9UHA3 163 aaKnown RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 RABL2BQ9UNT1 228 aa7.12□□□□□ -1.27
COL28A1-205ENST00000453441 TBL2Q9Y4P3 447 aaKnown RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 SETD2Q9BYW2 2564 aaPredicted RBP7.12□□□□□ -1.27
COL28A1-205ENST00000453441 C2CD3Q4AC94 2353 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 RNASEK-C17orf49H0YIS7 233 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 F2RL2O00254 374 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 NPFFO15130 113 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 XRCC3O43542 346 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 RGS11O94810 467 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 RNASE1P07998 156 aaKnown RBP7.11□□□□□ -1.27
COL28A1-205ENST00000453441 IGHV4-38-2P0DP08 117 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 DTYMKP23919 212 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 CDK2P24941 298 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 TALDO1P37837 337 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 MNDAP41218 407 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 KIR2DS4P43632 304 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 PRRX1P54821 245 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 LGALS4P56470 323 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 HTD2P86397 168 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ARFRP1Q13795 201 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 KIR2DS1Q14954 304 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 SPCS2Q15005 226 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 HMGN3Q15651 99 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 C17orf58Q2M2W7 97 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 PLAC9Q5JTB6 97 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 LY6G6FQ5SQ64 297 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 HACD4Q5VWC8 232 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 STEAP3Q658P3 488 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF626Q68DY1 528 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF880Q6PDB4 577 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 RBMS3Q6XE24 437 aaKnown RBP7.11□□□□□ -1.27
COL28A1-205ENST00000453441 Q6ZS49 121 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 BEND2Q8NDZ0 799 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 OR5H6Q8NGV6 325 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 OR4K15Q8NH41 348 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 DYNC2LI1Q8TCX1 351 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 MRGPRDQ8TDS7 321 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ARL11Q969Q4 196 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 SLC25A38Q96DW6 304 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 KIRREL1Q96J84 757 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 CLEC7AQ9BXN2 247 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 RBM38Q9H0Z9 239 aaKnown RBP7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ZMAT3Q9HA38 289 aaKnown RBP7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ING3Q9NXR8 418 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF581Q9P0T4 197 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 AK3Q9UIJ7 227 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 JPT1Q9UK76 154 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 AMMECR1Q9Y4X0 333 aaPredicted RBP7.11□□□□□ -1.27
COL28A1-205ENST00000453441 RNF114Q9Y508 228 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 MINOS1-NBL1R4GNA1 71 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 A3GALT2U3KPV4 340 aa7.11□□□□□ -1.27
COL28A1-205ENST00000453441 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 NIPBLQ6KC79 2804 aaeCLIP7.1□□□□□ -1.27
COL28A1-205ENST00000453441 A0A075B6Q4 140 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 IGHV2-26A0A0B4J1V2 119 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 C12orf77C9JDV5 145 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 C15orf65H3BRN8 121 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 TOR1AO14656 332 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 MELTFP08582 738 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 FBP1P09467 338 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 GNB3P16520 340 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 SSTR5P35346 364 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 CEACAM3P40198 252 aa7.1□□□□□ -1.27
COL28A1-205ENST00000453441 CBX5P45973 191 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms