RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 AGTRAPQ6RW13 159 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 CXCL17Q6UXB2 119 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 Q6ZRP5 223 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 LINC00173Q6ZV60 143 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 ANKRD29Q8N6D5 301 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR2G3Q8NGZ4 309 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR8S1Q8NH09 359 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR10G6Q8NH81 332 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR5K1Q8NHB7 308 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF519Q8TB69 540 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 CT55Q8WUE5 264 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 SLC25A44Q96H78 314 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 FCRL1Q96LA6 429 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 LINC01587Q99440 93 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 MRPL20Q9BYC9 149 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 POLR2J2Q9GZM3 115 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 POLR2J3Q9H1A7 115 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 MMP26Q9NRE1 261 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 COA4Q9NYJ1 87 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 MED11Q9P086 117 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM216Q9P0N5 145 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 DPM3Q9P2X0 92 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 GNG8Q9UK08 70 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 BTRCQ9Y297 605 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 MYO15BQ96JP2 1530 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 NPHP4O75161 1426 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 PTPRKQ15262 1439 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 SMG6Q86US8 1419 aaKnown RBP3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 PTPRJQ12913 1337 aa3.42□□□□□ -1.86
HMGB3P21-201ENST00000452483 KDM5BQ9UGL1 1544 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 IGHV7-81A0A0B4J1V7 117 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 TRAV26-2A0A0B4J265 109 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 WI2-2373I1.2A0A1W2PRP0 233 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR5H14A6NHG9 310 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 PRAC2D3DTV9 90 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 J3KT08 172 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 K7ERU9 68 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 AIPO00170 330 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 SUPT7LO94864 414 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 DUS4LO95620 317 aaKnown RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 S100A8P05109 93 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 CPMP14384 443 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 IL2RGP31785 369 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 KLF3P57682 345 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 UBE2NP61088 152 aaKnown RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 RRAS2P62070 204 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 FABP5Q01469 135 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 IFITM3Q01628 133 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 ADIGQ0VDE8 80 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 RHEBQ15382 184 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 RBMY1FQ15415 496 aaKnown RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 FCN2Q15485 313 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR8B8Q15620 311 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 GRK1Q15835 563 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 KCNJ8Q15842 424 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 LTC4SQ16873 150 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 RNASE10Q5GAN6 216 aaKnown RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 FAM222AQ5U5X8 452 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 LCN8Q6JVE9 175 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 STRADAQ7RTN6 431 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 ATP5L2Q7Z4Y8 100 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM252Q8N6L7 170 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF283Q8N7M2 679 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 AQP11Q8NBQ7 271 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR8B12Q8NGG6 310 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 OR13C4Q8NGS5 318 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 FAM151AQ8WW52 585 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF501Q96CX3 271 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 FXYD5Q96DB9 178 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 SERPINI1Q99574 410 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 LRRC61Q9BV99 259 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 TMEM147Q9BVK8 224 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 TBL1XR1Q9BZK7 514 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 EIF5A2Q9GZV4 153 aaKnown RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 DEFB127Q9H1M4 99 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 ZNF331Q9NQX6 463 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 FAM49BQ9NUQ9 324 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 AIG1Q9NVV5 245 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 MARCH5Q9NX47 278 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 CALML5Q9NZT1 146 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 POMPQ9Y244 141 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 INSIG2Q9Y5U4 225 aa3.41□□□□□ -1.86
HMGB3P21-201ENST00000452483 SPEF2Q9C093 1822 aa3.4□□□□□ -1.86
HMGB3P21-201ENST00000452483 A0A087WX48 190 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 C9orf170A2RU37 121 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 KNCNA6PVL3 124 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 INMT-MINDY4F8WBC2 141 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 SAP18O00422 153 aaKnown RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ANGPTL7O43827 346 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 SS18L1O75177 396 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 ZNF780AO75290 641 aaPredicted RBP3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 BANF1O75531 89 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 IGHMP01871 453 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 FABP3P05413 133 aa3.4□□□□□ -1.87
HMGB3P21-201ENST00000452483 TSPAN19P0C672 248 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms