RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TMEM108Q6UXF1 575 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 FBXL14Q8N1E6 418 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 GJC3Q8NFK1 279 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 REEP6Q96HR9 211 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 H7BYZ3 331 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 DBHP09172 617 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 FOXL2P58012 376 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 SP5Q6BEB4 398 aaPredicted RBP11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 Q9N2K0 584 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 RHBDD3Q9Y3P4 386 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF320A2RRD8 509 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 YPEL1O60688 119 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 OMGP23515 440 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 PI4KAP42356 2102 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF121P58317 390 aaPredicted RBP11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 LDLRAD2Q5SZI1 272 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 FBXW12Q6X9E4 464 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 FAM57BQ71RH2 274 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 LYPD6Q86Y78 171 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 RNF138Q8WVD3 245 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 OXGR1Q96P68 337 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 YPEL2Q96QA6 119 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 METTL7AQ9H8H3 244 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR6C3Q9NZP0 311 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 C19orf25Q9UFG5 118 aaPredicted RBP11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
SYNGAP1-204ENST00000449372 SOCS1O15524 211 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 SFTPDP35247 375 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 FMODQ06828 376 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 PLAC9Q5JTB6 97 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 IMMP2LQ96T52 175 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF286AQ9HBT8 521 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 WDFY4Q6ZS81 3184 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 RAD51DO75771 328 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 UNQ5815/PRO19632Q6UWF5 114 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 GNPNAT1Q96EK6 184 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 CYYR1Q96J86 154 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 DUSP23Q9BVJ7 150 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 FSCN3Q9NQT6 498 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 IGHV2-70DA0A0C4DH43 119 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 IGHV5-10-1A0A0J9YXX1 117 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 FGF8P55075 233 aaPredicted RBP11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 SP6Q3SY56 376 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 KCNE4Q8WWG9 221 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 SPSB1Q96BD6 273 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 PECRQ9BY49 303 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
SYNGAP1-204ENST00000449372 A6NJY4 79 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 LIPT2A6NK58 231 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 MS4A18H0YCH9 400 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 J3QW42 95 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 PDGFBP01127 241 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 PRDX4Q13162 271 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 MS4A18Q3C1V0 323 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 OCIAD2Q56VL3 154 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 ZNF709Q8N972 641 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 FAM24AA6NFZ4 105 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 CCL1P22362 96 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 CCL7P80098 99 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 KISS1Q15726 138 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 Q6ZWC4 215 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 H1FOOQ8IZA3 346 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 FAM89BQ8N5H3 189 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 CISD2Q8N5K1 135 aaKnown RBP11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR52M1Q8NGK5 317 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 MED29Q9NX70 200 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 FCGR2AP12318 317 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR3A4PP47883 348 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 MRPL49Q13405 166 aaKnown RBP11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 LHFPL4Q7Z7J7 247 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR8B12Q8NGG6 310 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR2T10Q8NGZ9 312 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 RASL10BQ96S79 203 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 TXN2Q99757 166 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 LYRM2Q9NU23 88 aaPredicted RBP11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 CISD1Q9NZ45 108 aaKnown RBP11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 PRSS50Q9UI38 385 aa11.61□□□□□ -0.55
SYNGAP1-204ENST00000449372 RUNX1Q01196 453 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 HLA-BQ31612 363 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 ANKRD37Q7Z713 158 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 ABHD14BQ96IU4 210 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 NAA60Q9H7X0 242 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 SEC16AO15027 2179 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 A0A0A6YYD4 124 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 LILRA1O75019 489 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 HRASP01112 189 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 BCL2P10415 239 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 MSR1P21757 451 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 WDFY1Q8IWB7 410 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 CMTM2Q8TAZ6 248 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 APH1AQ96BI3 265 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 BOD1Q96IK1 185 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 TM2D1Q9BX74 207 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 CST9LQ9H4G1 147 aa11.6□□□□□ -0.55
SYNGAP1-204ENST00000449372 WIPI2Q9Y4P8 454 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms