RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 FAM90A10PA6NDY2 464 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 FAM90A7PA6NKC0 464 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 FAM90A23PA8MXZ1 464 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SLC31A2O15432 143 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MAS1P04201 325 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 REG1BP48304 166 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ZNF137PP52743 207 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 GP2P55259 537 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SYT6Q5T7P8 510 aaPredicted RBP12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 AWAT2Q6E213 333 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SIGIRRQ6IA17 410 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 RAB12Q6IQ22 244 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ETV3LQ6ZN32 361 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 NANOGP1Q8N7R0 232 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 LINC00482Q8N8I6 264 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 NEK7Q8TDX7 302 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 Q96M66 194 aa12.52□□□□□ -0.41
SPTLC1P1-201ENST00000447199 IGHV3-72A0A0B4J1Y9 119 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MCRIP1C9JLW8 97 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 PF4P02776 101 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 GLAP06280 429 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MGMTP16455 207 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ZNF134P52741 427 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 RPL23AP62750 156 aaKnown RBP12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MOB3BQ86TA1 216 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 TGIF2LXQ8IUE1 241 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 STX19Q8N4C7 294 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MRAPQ8TCY5 172 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CHPT1Q8WUD6 406 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 UQCC2Q9BRT2 126 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 BANF2Q9H503 90 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 PLSCR3Q9NRY6 295 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MBNL3Q9NUK0 354 aaKnown RBP12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ETAA1Q9NY74 926 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
SPTLC1P1-201ENST00000447199 LINC01548A6NM66 108 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MYL12BO14950 172 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CA11O75493 328 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 HBZP02008 142 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 RCC1P18754 421 aaPredicted RBP12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CD1BP29016 333 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 VHLP40337 213 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SLC35A2P78381 396 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 INSL4Q14641 139 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 RNLSQ5VYX0 342 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 UNQ9370/PRO34162Q6UXP9 181 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 C18orf65Q6ZTR6 163 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 OR2W3Q7Z3T1 314 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SLC35E3Q7Z769 313 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 Q8N9W7 124 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 BPIFB6Q8NFQ5 453 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 OR4K15Q8NH41 348 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 TFAP2CQ92754 450 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 RCC1LQ96I51 464 aaKnown RBP12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SELENOIQ9C0D9 397 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ABCG5Q9H222 651 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SERPINE3A8MV23 424 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ZNF736B4DX44 427 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 SPINT2O43291 252 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CRTAPO75718 401 aaPredicted RBP12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 FUT3P21217 361 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 C6orf141Q5SZD1 244 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MRPL41Q8IXM3 137 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 STPG2Q8N412 459 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 OR2T10Q8NGZ9 312 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 OR1L1Q8NH94 360 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 THRSPQ92748 146 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 LIN7CQ9NUP9 197 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 GNG12Q9UBI6 72 aa12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 LSM2Q9Y333 95 aaKnown RBP12.49□□□□□ -0.41
SPTLC1P1-201ENST00000447199 TXNL1O43396 289 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 PDCD6O75340 191 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 DUS4LO95620 317 aaKnown RBP12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CDK1P06493 297 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 CD37P11049 281 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 IL3RAP26951 378 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 GPR12P47775 334 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 THBS3P49746 956 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 KRTAP10-11P60412 298 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 FAM27D1Q5T7N8 215 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 STEAP3Q658P3 488 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 TRAT1Q6PIZ9 186 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 ZNF554Q86TJ5 538 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 LRRTM1Q86UE6 522 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 COMMD1Q8N668 190 aa12.48□□□□□ -0.41
SPTLC1P1-201ENST00000447199 OR10V1Q8NGI7 309 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms