RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 THSD4Q6ZMP0 1018 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 OR4A5Q8NH83 315 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 SMDT1Q9H4I9 107 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 ZDHHC11Q9H8X9 412 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 LYRM2Q9NU23 88 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 KLK11Q9UBX7 282 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 LOC105371242A0A075B767 164 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TM4SF5O14894 197 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 GLI4P10075 376 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 PI3P19957 117 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 ACAA2P42765 397 aaKnown RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RBM11P57052 281 aaKnown RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 CXorf66Q5JRM2 361 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 C10orf113Q5VZT2 155 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RTN4RL2Q86UN3 420 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 OR10J6PQ8NGY7 276 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 RSRP1Q9BUV0 290 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 HYAL3O43820 417 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 CXorf1O96002 111 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 ASAH2BP0C7U1 165 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 KIAA0141Q14154 515 aaPredicted RBP7.45□□□□□ -1.22
PTPN3-204ENST00000446349 TMEM186Q96B77 213 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 PLPPR2Q96GM1 343 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 LRRC3BQ96PB8 259 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 SCNM1Q9BWG6 230 aa7.45□□□□□ -1.22
PTPN3-204ENST00000446349 A0A1B0GTL3 188 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 CCL2P13500 99 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 RPL27AP46776 148 aaKnown RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 RPS4XP62701 263 aaKnown RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 RPEL1Q2QD12 228 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 SEZ6L2Q6UXD5 910 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 OR10G4Q8NGN3 311 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 OR10G9Q8NGN4 311 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 OR10G7Q8NGN6 311 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF418Q8TF45 676 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 C14orf79Q96F83 325 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 GPA33Q99795 319 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 KIF26BQ2KJY2 2108 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 MFSD2BA6NFX1 497 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 ORM2P19652 201 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 SUMO1P63165 101 aaKnown RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 MYPOPQ86VE0 399 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 OR5H6Q8NGV6 325 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 RXFP4Q8TDU9 374 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 TINAGL1Q9GZM7 467 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 J3QR06 171 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 PGA4P0DJD7 388 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 PGA5P0DJD9 388 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 LOXL3P58215 753 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 COL10A1Q03692 680 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 FAM57AQ8TBR7 257 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 UCN2Q96RP3 112 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF729A6NN14 1252 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 CST7O76096 145 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 WNT1P04628 370 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 MUC1P15941 1255 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 MPV17P39210 176 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 RNASE6Q93091 150 aaKnown RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 ZG16BQ96DA0 208 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 C19orf24Q9BVV8 132 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 LOC390937A0A1W2PQ73 354 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 MAP1LC3B2A6NCE7 125 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 OR4C45A6NMZ5 311 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 PRSS23O95084 383 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 SMIM10L1P0DMW3 83 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 P2RX3P56373 397 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 BTN1A1Q13410 526 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 FAM90A1Q86YD7 464 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 SMIM10Q96HG1 83 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 MAP1LC3BQ9GZQ8 125 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 PMP22Q01453 160 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 PCOLCEQ15113 449 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 SLC25A47Q6Q0C1 308 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 FRRS1LQ9P0K9 344 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 FAM157AC9JC47 383 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 FAM90A26D6RGX4 464 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 CDC42EP2O14613 210 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 PF4V1P10720 104 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 RELBQ01201 579 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 C3AR1Q16581 482 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 STARD4Q96DR4 205 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 WDR89Q96FK6 387 aaPredicted RBP7.44□□□□□ -1.22
PTPN3-204ENST00000446349 OR4C12Q96R67 309 aa7.44□□□□□ -1.22
PTPN3-204ENST00000446349 GEMIN2O14893 280 aaKnown RBP7.43□□□□□ -1.22
PTPN3-204ENST00000446349 HIGD1AQ9Y241 93 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 H0Y8G0 127 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF737O75373 536 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 ZNF645Q8N7E2 425 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 C5orf17Q8NAS9 161 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 FAM216AQ8WUB2 273 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 IDI2-AS1Q9NZ38 188 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 A0A0G2JLM5 398 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 C9orf172C9J069 976 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 M0QZK8 103 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 CHST1O43916 411 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 TNFSF10P50591 281 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 ROM1Q03395 351 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
PTPN3-204ENST00000446349 Q6ZN92 141 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms