RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 C17orf58Q2M2W7 97 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 PYHIN1Q6K0P9 492 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 MOB1BQ7L9L4 216 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 PDZD9Q8IXQ8 264 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 IL1F10Q8WWZ1 152 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 SIRT7Q9NRC8 400 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 MBNL3Q9NUK0 354 aaKnown RBP14.11□□□□□ -0.15
LIME1-202ENST00000444951 TAS2R3Q9NYW6 316 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 AUP1Q9Y679 476 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 V9GYH0 126 aa14.11□□□□□ -0.15
LIME1-202ENST00000444951 TRBV6-6A0A0A6YYG2 114 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 hCG_1809904A0A1W2PP81 198 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 A0A1W2PPE2 198 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 A0A1W2PR64 198 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 A0A1W2PRV1 198 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 SPINT2O43291 252 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 HBZP02008 142 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 LPLP06858 475 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 DTYMKP23919 212 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 GDNFP39905 211 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 HLA-DRB3P79483 266 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 DGCR2P98153 550 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 PAX8Q06710 450 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 TRAT1Q6PIZ9 186 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 VMO1Q7Z5L0 202 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 Q8N7P7 452 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 OR52I2Q8NH67 350 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 C15orf40Q8WUR7 153 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 SUCNR1Q9BXA5 334 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 ZNF286AQ9HBT8 521 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 IDI2-AS1Q9NZ38 188 aa14.1□□□□□ -0.15
LIME1-202ENST00000444951 IGHV3OR16-10A0A075B7F0 116 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 IGKV1D-8A0A087WSZ0 117 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 IGHV3-43A0A0B4J1X8 118 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 C17orf98A8MV24 154 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 TRDCB7Z8K6 153 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 C15orf65H3BRN8 121 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 M0R1W7 72 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 ORC5O43913 435 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 IGHV3-7P01780 117 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 SCTP09683 121 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 CGB3P0DN86 165 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 CGB7P0DN87 165 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 IGHV3-43DP0DP04 118 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 GATA3P23771 443 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 COX7A1P24310 79 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 CBX5P45973 191 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 KIR3DL3Q8N743 410 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 GPX8Q8TED1 209 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 FCAMRQ8WWV6 532 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 KIRREL1Q96J84 757 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 SOSTQ9BQB4 213 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 TMPRSS13Q9BYE2 586 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 SIRPDQ9H106 197 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 SCPEP1Q9HB40 452 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 KPTNQ9Y664 436 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 DSCAML1Q8TD84 2053 aa14.09□□□□□ -0.15
LIME1-202ENST00000444951 KIAA2026Q5HYC2 2103 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 A0A1W2PRD5 423 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 A0A1W2PRF3 423 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 A0A1W2PRM7 423 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 SDCBPO00560 298 aaPredicted RBP14.08□□□□□ -0.16
LIME1-202ENST00000444951 GSTT2P0CG29 244 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 GSTT2BP0CG30 244 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 IGHV1-8P0DP01 117 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 KLRD1Q13241 179 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 HMGN3Q15651 99 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 OR52W1Q6IF63 320 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 FAM53AQ6NSI3 398 aaPredicted RBP14.08□□□□□ -0.16
LIME1-202ENST00000444951 C11orf42Q8N5U0 333 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 BEST4Q8NFU0 473 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 OR10V1Q8NGI7 309 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 LEAP2Q969E1 77 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 LHX4Q969G2 390 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 TBX15Q96SF7 602 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 OCSTAMPQ9BR26 566 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 METTL8Q9H825 291 aaKnown RBP14.08□□□□□ -0.16
LIME1-202ENST00000444951 RABL2AQ9UBK7 228 aaPredicted RBP14.08□□□□□ -0.16
LIME1-202ENST00000444951 OPN4Q9UHM6 478 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 MGAT4AQ9UM21 535 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 RABL2BQ9UNT1 228 aa14.08□□□□□ -0.16
LIME1-202ENST00000444951 J3QLI3 93 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 BET1O15155 118 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 FABP7O15540 132 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 TPPPO94811 219 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 AVPP01185 164 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 MMP9P14780 707 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 KIR2DS4P43632 304 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 ARPC4P59998 168 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 KIR2DS1Q14954 304 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 ZNF79Q15937 498 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 UTF1Q5T230 341 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 HEPN1Q6WQI6 88 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 HOGA1Q86XE5 327 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 OR52L2PQ8NGH6 319 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 GALMQ96C23 342 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 RAB9BQ9NP90 201 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 GNG12Q9UBI6 72 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 KLK11Q9UBX7 282 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms