RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MTFP1Q9UDX5 166 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 HIST1H1DP16402 221 aaKnown RBP6.87□□□□□ -1.31
CCDC39-201ENST00000442201 BLVRBP30043 206 aaPredicted RBP6.87□□□□□ -1.31
CCDC39-201ENST00000442201 SELENOVP59797 346 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 GUCA2AQ02747 115 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 ARL6IP1Q15041 203 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 LHFPL4Q7Z7J7 247 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 OSR2Q8N2R0 312 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 KCNRGQ8N5I3 272 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 OR10D4PQ8NGN7 298 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 OR13G1Q8NGZ3 307 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 GPX8Q8TED1 209 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 ARL11Q969Q4 196 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 SEH1LQ96EE3 360 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 Q96M66 194 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 TAS2R8Q9NYW2 309 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 PCNX1Q96RV3 2341 aa6.87□□□□□ -1.31
CCDC39-201ENST00000442201 PRR14LQ5THK1 2151 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 RNF222A6NCQ9 220 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 NKX2-6A6NCS4 301 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 WIPF3A6NGB9 483 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 FAM157AC9JC47 383 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TRAPPC2LH3BP13 241 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ATXN7O15265 892 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 IGHV3-13P01766 116 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MELTFP08582 738 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 GNB3P16520 340 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM50BP56557 158 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 KLF3P57682 345 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ACTBP60709 375 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ACTG1P63261 375 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 SSBP1Q04837 148 aaKnown RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 SLC22A25Q6T423 547 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 FBXL14Q8N1E6 418 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF664Q8N3J9 261 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 OR13C8Q8NGS7 320 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TMEM171Q8WVE6 324 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 PKIBQ9C010 78 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MFFQ9GZY8 342 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 OR51I2Q9H344 312 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TREM1Q9NP99 234 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 LRP5LA4QPB2 252 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 A6NLC8 198 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 J3QT63 122 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 RPLP1P05386 114 aaKnown RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 FGF7P21781 194 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 GABRR1P24046 479 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 GMFBP60983 142 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 BSPH1Q075Z2 132 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 IL24Q13007 206 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TAF9Q16594 264 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 C1orf122Q6ZSJ8 110 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 NUP37Q8NFH4 326 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 OR10AD1Q8NGE0 317 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 RNASEH2CQ8TDP1 164 aaKnown RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ARHGAP5-AS1Q96IT6 56 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 GINS4Q9BRT9 223 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 METTL8Q9H825 291 aaKnown RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ST3GAL6Q9Y274 331 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TMED3Q9Y3Q3 217 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 PUS1Q9Y606 427 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MYO7BQ6PIF6 2116 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 NBEAQ8NFP9 2946 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ANKRD20A5PA0PJZ0 165 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MEIS3P1A6NDR6 274 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 NAP1L6A6NFF2 107 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 BCL2L11O43521 198 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 SYNGR1O43759 233 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 GNLYP22749 145 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 NPBWR2P48146 333 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 TLE1Q04724 770 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 JOSD1Q15040 202 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MSMPQ1L6U9 139 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 PCGF3Q3KNV8 242 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ARSJQ5FYB0 599 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 PLAC9Q5JTB6 97 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 OR51S1Q8NGJ8 323 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 ACTR3CQ9C0K3 210 aaPredicted RBP6.86□□□□□ -1.31
CCDC39-201ENST00000442201 WDR13Q9H1Z4 485 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 CXXC4Q9H2H0 198 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MSL2Q9HCI7 577 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 MTCH1Q9NZJ7 389 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 CACFD1Q9UGQ2 172 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 POLDIP2Q9Y2S7 368 aa6.86□□□□□ -1.31
CCDC39-201ENST00000442201 IGLV3-9A0A075B6K5 115 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 H0YL77 283 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 MFNGO00587 321 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 MLNRO43193 412 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 CREBL2O60519 120 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-201ENST00000442201 CSF1P09603 554 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 BCL3P20749 454 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 AKR1C2P52895 323 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 H2BFSP57053 126 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 AKR1C1Q04828 323 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 MZT1Q08AG7 82 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF154Q13106 437 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 ARFRP1Q13795 201 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms