RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CEACAM6P40199 344 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 CEBPDP49716 269 aaPredicted RBP5.06□□□□□ -1.6
VPS50-205ENST00000441602 P2RX3P56373 397 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 IFITM2Q01629 132 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 GNMTQ14749 295 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 KCNRGQ8N5I3 272 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 C14orf79Q96F83 325 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PLEKHA2Q9HB19 425 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 CCL28Q9NRJ3 127 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 MBD2Q9UBB5 411 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 GNG12Q9UBI6 72 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 SPTBN2O15020 2390 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.06□□□□□ -1.6
VPS50-205ENST00000441602 NDUFA2O43678 99 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 ATP6V1G1O75348 118 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 ADAP1O75689 374 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 HBZP02008 142 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 WNT2P09544 360 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PLA2G5P39877 138 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 EDDM3BP56851 147 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 VAMP2P63027 116 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 AESQ08117 197 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 LY6DQ14210 128 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 DAZAP2Q15038 168 aaPredicted RBP5.06□□□□□ -1.6
VPS50-205ENST00000441602 MSMPQ1L6U9 139 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 C4orf17Q53FE4 359 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 TMEM268Q5VZI3 342 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 EIF5AL1Q6IS14 154 aaKnown RBP5.06□□□□□ -1.6
VPS50-205ENST00000441602 MRGPRDQ8TDS7 321 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 FAM222BQ8WU58 562 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 SDSLQ96GA7 329 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 TMEM222Q9H0R3 208 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 JPT1Q9UK76 154 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 TNFSF18Q9UNG2 199 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 ZNF292O60281 2723 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PPIAL4EA0A075B759 164 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 hADV38S2A0JD32 116 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 C12orf77C9JDV5 145 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PPIAL4DF5H284 164 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 TAAR5O14804 337 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 ST8SIA3O43173 380 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 BCL2L11O43521 198 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PSPNO60542 156 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PPIAL4FP0DN26 164 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 EGR1P18146 543 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 AGAP20933 346 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 SSTR2P30874 369 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 RAB7AP51149 207 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 HTD2P86397 168 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 BVESQ8NE79 360 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 RBPMSQ93062 196 aaKnown RBP5.06□□□□□ -1.6
VPS50-205ENST00000441602 RRNAD1Q96FB5 475 aaKnown RBP5.06□□□□□ -1.6
VPS50-205ENST00000441602 ARPC5LQ9BPX5 153 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 GCM1Q9NP62 436 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 OR2S2Q9NQN1 319 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 LAMP3Q9UQV4 416 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 PPIAL4AQ9Y536 164 aa5.06□□□□□ -1.6
VPS50-205ENST00000441602 E5RGE8 158 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 F5H0A9 414 aaPredicted RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 K7N7A8 449 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 F2RP25116 425 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 UCP1P25874 307 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 HERPUD1Q15011 391 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 PCSK4Q6UW60 755 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 CD177Q8N6Q3 437 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 OR1L1Q8NH94 360 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 TMEM56Q96MV1 263 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 CNTNAP3BQ96NU0 1288 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 CNTNAP3Q9BZ76 1288 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 CISD1Q9NZ45 108 aaKnown RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 NSG2Q9Y328 171 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 LSM5Q9Y4Y9 91 aaKnown RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 TMEM56-RWDD3S4R434 201 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZGRF1Q86YA3 2104 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 HEATR1Q9H583 2144 aaKnown RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 IGHV3OR15-7A0A075B7D8 119 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 TRAV14DV4A0A0A6YYC5 116 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 IGKV1-6A0A0C4DH72 117 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 NKX2-6A6NCS4 301 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF729A6NN14 1252 aaPredicted RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 C3orf80F5H4A9 247 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 NDUFB3O43676 98 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF737O75373 536 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 PGLYRP1O75594 196 aaPredicted RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 LHBP01229 141 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 HEXAP06865 529 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 OR8U9P0C7N5 309 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF16P17020 682 aaPredicted RBP5.05□□□□□ -1.6
VPS50-205ENST00000441602 CXCL2P19875 107 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 VDAC1P21796 283 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 GLIPR1P48060 266 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ADORA2A-AS1P86434 159 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 SP6Q3SY56 376 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 LRRC10Q5BKY1 277 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 Q5BKY6 102 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 TEX36Q5VZQ5 186 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 TEX261Q6UWH6 196 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF66Q6ZN08 573 aa5.05□□□□□ -1.6
VPS50-205ENST00000441602 ZNF818PQ6ZRF7 136 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms