RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 COX5AP20674 150 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 DCKP27707 260 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 GTF2E2P29084 291 aaKnown RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 IL12BP29460 328 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 FGF9P31371 208 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 IFNA8P32881 189 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CFHR2P36980 270 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 BDKRB1P46663 353 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SERPINB8P50452 374 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRKXP51817 358 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 PSMD4P55036 377 aaKnown RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 PRPS1P60891 318 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 RPL26P61254 145 aaKnown RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ST3GAL3Q11203 375 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLAMF1Q13291 335 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 GNA13Q14344 377 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 GNMTQ14749 295 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMED2Q15363 201 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CYTH1Q15438 398 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 DGUOKQ16854 277 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CDKL4Q5MAI5 379 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SAPCD1Q5SSQ6 148 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 FAM27D1Q5T7N8 215 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TSPO2Q5TGU0 170 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZNF470Q6ECI4 717 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 EPGNQ6UW88 154 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 LRRC74BQ6ZQY2 392 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 COX15Q7KZN9 410 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SETD3Q86TU7 594 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TAC4Q86UU9 113 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CTAGE3PQ8IX95 158 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 C4orf33Q8N1A6 199 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CYP4Z2PQ8N1L4 340 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 RNF182Q8N6D2 247 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 NPWQ8N729 165 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ATP6V0D2Q8N8Y2 350 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 Q8N9W7 124 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 INO80EQ8NBZ0 244 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 NECAP1Q8NC96 275 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 DEFB108BQ8NET1 73 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR4F6Q8NGB9 312 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR8J2Q8NGG1 315 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR51S1Q8NGJ8 323 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR4C13Q8NGP0 309 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 UBALD1Q8TB05 177 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 NUBPLQ8TB37 319 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM239Q8WW34 195 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 PIH1D2Q8WWB5 315 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 UBE2E3Q969T4 207 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 CCDC126Q96EE4 140 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SMIM10Q96HG1 83 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TRIB3Q96RU7 358 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 LYSMD1Q96S90 227 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SORT1Q99523 831 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TBL1YQ9BQ87 522 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MRPL57Q9BQC6 102 aaKnown RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZNF649Q9BS31 505 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MED10Q9BTT4 135 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 HINT2Q9BX68 163 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MAP1LC3CQ9BXW4 147 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SHCBP1LQ9BZQ2 653 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ZYG11BQ9C0D3 744 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 DRC3Q9H069 523 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 PPA2Q9H2U2 334 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 DPH3P1Q9H4G8 78 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLC25A22Q9H936 323 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 UGT1A7Q9HAW7 530 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 UGT1A10Q9HAW8 530 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 UGT1A8Q9HAW9 530 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 SLCO1B3Q9NPD5 702 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR2S2Q9NQN1 319 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 BATF3Q9NR55 127 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 RBM22Q9NW64 420 aaKnown RBP eCLIP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 MS4A12Q9NXJ0 267 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TAS2R1Q9NYW7 299 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMEM216Q9P0N5 145 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 NUFIP1Q9UHK0 495 aaKnown RBP1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 KIF25Q9UIL4 384 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 NAGKQ9UJ70 344 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 FBXO5Q9UKT4 447 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 APLNQ9ULZ1 77 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 TMCO1Q9UM00 188 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ASF1AQ9Y294 204 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 ACOT9Q9Y305 439 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 OR51B4Q9Y5P0 310 aa1.41□□□□□ -2.18
HMGB1P18-201ENST00000438801 A0A0G2JMM0 328 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A1W2PPB8 328 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A1W2PRF3 423 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A1W2PRM7 423 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 A0A1W2PRS3 328 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RAB19A4D1S5 217 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 OR5K4A6NMS3 321 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ZNF705EA8MWA4 302 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 KIR3DP1A8MWS1 328 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 TRDCB7Z8K6 153 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 ANKRD65E5RJM6 399 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 F5H5T6 163 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 H0YJX3 145 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 RFXANKO14593 260 aa1.4□□□□□ -2.19
HMGB1P18-201ENST00000438801 PRMT5O14744 637 aaPredicted RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms