RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 PPYP01298 95 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 CTSDP07339 412 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 SURF2Q15527 256 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 AQP3Q92482 292 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 CCL17Q92583 94 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 DEFB108AA8MXU0 73 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 SYNGR1O43759 233 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 RPS2P15880 293 aaKnown RBP9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 C21orf62-AS1Q17RA5 79 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 SPANXN5Q5MJ07 72 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 Q6ZT83 130 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 WDYHV1Q96HA8 205 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 PLEKHA2Q9HB19 425 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 TREM2Q9NZC2 230 aa9.97□□□□□ -0.81
TRAPPC9-202ENST00000438773 A0A1W2PPQ1 181 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 JTBO76095 146 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 KRASP01116 189 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 NPBWR1P48145 328 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 PLA2G2CQ5R387 149 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 GGNBP1Q5YKI7 109 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 VWA1Q6PCB0 445 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 ZNF561Q8N587 486 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 POM121Q96HA1 1249 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 ALX4Q9H161 411 aaPredicted RBP9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 GP6Q9HCN6 339 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 PTPRQQ9UMZ3 2332 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 TRGV10A0A0A0MS01 117 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 TRDCB7Z8K6 153 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 CCL21O00585 134 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 ABCD4O14678 606 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 MPPED1O15442 326 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 HEXAP06865 529 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 FCGR3AP08637 254 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 IGFBP3P17936 291 aaPredicted RBP9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 MDH2P40926 338 aaKnown RBP9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 FGF12P61328 243 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 KLRB1Q12918 225 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 SRSF6Q13247 344 aaKnown RBP9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 TLNRD1Q9H1K6 362 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 BARX1Q9HBU1 254 aaPredicted RBP9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 RASL12Q9NYN1 266 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 FBXL17Q9UF56 701 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 OSGIN2Q9Y236 505 aa9.96□□□□□ -0.81
TRAPPC9-202ENST00000438773 HAND1O96004 215 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 MOGAT3Q86VF5 341 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 TOLLIPQ9H0E2 274 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 PARD6AQ9NPB6 346 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGHV3-43A0A0B4J1X8 118 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 C3orf85A0A1B0GTC6 90 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 A0A1W2PPV4 95 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGHV3-13P01766 116 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGHV3-7P01780 117 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 IGHV3-43DP0DP04 118 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 NPBWR2P48146 333 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 SRSF3P84103 164 aaKnown RBP9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 ZNF816Q0VGE8 651 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 PDLIM3Q53GG5 364 aaPredicted RBP9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 VAX1Q5SQQ9 334 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 SLC2A9Q9NRM0 540 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMED3Q9Y3Q3 217 aa9.96□□□□□ -0.82
TRAPPC9-202ENST00000438773 TAAR5O14804 337 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 HOXB1P14653 301 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 FOXO1Q12778 655 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 TIMD4Q96H15 378 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 S1PR3Q99500 378 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 hCG_38984A0A1B0GV85 526 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 ZNF727A8MUV8 499 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 RPL36A-HNRNPH2H7BZ11 118 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 YIF1AO95070 293 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 HOXA1P49639 335 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 GFRA1P56159 465 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 CABLES2Q9BTV7 478 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 FOXD3Q9UJU5 478 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 TRIOO75962 3097 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 FAM24AA6NFZ4 105 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 H0Y8G0 127 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 DFFBO76075 338 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 FAM87AP0C7U9 286 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 FOXG1P55316 489 aaPredicted RBP9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 AWAT1Q58HT5 328 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 Q96M66 194 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 PLEKHA3Q9HB20 300 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 GAR1Q9NY12 217 aaKnown RBP9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 PSG11Q9UQ72 335 aa9.95□□□□□ -0.82
TRAPPC9-202ENST00000438773 ADCYAP1P18509 176 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 TMEM33P57088 247 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 ZNF826PQ6ZT77 177 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 EIF4E3Q8N5X7 224 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 HIPK2Q9H2X6 1198 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 LAMP3Q9UQV4 416 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 RCL1Q9Y2P8 373 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 V9GYS6 101 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 AQP7O14520 342 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 TDGF1P13385 188 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 CTSSP25774 331 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 RPL19P84098 196 aaKnown RBP9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 NRN1LQ496H8 165 aa9.94□□□□□ -0.82
TRAPPC9-202ENST00000438773 LDLRAD3Q86YD5 345 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms