RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF319Q9P2F9 582 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PSG11Q9UQ72 335 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 HS3ST3B1Q9Y662 390 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 ATP23Q9Y6H3 246 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PLXNB3Q9ULL4 1909 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 A0A0A6YYD4 124 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 A0A1W2PQM1 296 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 A0A1W2PR80 420 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PMS2P1A4D2B8 440 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 OR5H1A6NKK0 313 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 CLPSP04118 112 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PCOLCEQ15113 449 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 TGIF1Q15583 401 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 IQCJQ1A5X6 159 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 Q3ZCU0 254 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 SLC25A53Q5H9E4 307 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 LINC00596Q86U02 117 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 NFAM1Q8NET5 270 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 CT55Q8WUE5 264 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 BORCS7Q96B45 105 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 DAZAP1Q96EP5 407 aaKnown RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 MARS2Q96GW9 593 aaKnown RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF488Q96MN9 340 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 MTCH1Q9NZJ7 389 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 METTL1Q9UBP6 276 aaKnown RBP5.78□□□□□ -1.48
CSDE1-205ENST00000438362 PITPNC1Q9UKF7 332 aa5.78□□□□□ -1.48
CSDE1-205ENST00000438362 A0A087X0M5 115 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 A0A1B0GX30 115 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 MEX3AA1L020 520 aaKnown RBP5.77□□□□□ -1.48
CSDE1-205ENST00000438362 CDIPTO14735 213 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 OR7C2O60412 319 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 FGF5P12034 268 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 CCL1P22362 96 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 MEOX1P50221 254 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 TAS2R45P59539 299 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 SRSF4Q08170 494 aaKnown RBP5.77□□□□□ -1.48
CSDE1-205ENST00000438362 ETV3LQ6ZN32 361 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 SELENOHQ8IZQ5 122 aaKnown RBP5.77□□□□□ -1.48
CSDE1-205ENST00000438362 CISD2Q8N5K1 135 aaKnown RBP5.77□□□□□ -1.48
CSDE1-205ENST00000438362 SARAFQ96BY9 339 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 BOD1Q96IK1 185 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 TP53RKQ96S44 253 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF665Q9H7R5 613 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 MANBALQ9NQG1 85 aa5.77□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF331Q9NQX6 463 aaPredicted RBP5.77□□□□□ -1.48
CSDE1-205ENST00000438362 HELZP42694 1942 aaKnown RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 DEFB108AA8MXU0 73 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 FCGR3BO75015 233 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 TRGC2P03986 189 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CFPP27918 469 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 PMS2P11Q13670 270 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 FAM209BQ5JX69 171 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 DBX2Q6ZNG2 339 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 RBMXL3Q8N7X1 1067 aaKnown RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 OR5D13Q8NGL4 314 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 OR1K1Q8NGR3 316 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 MRGPRDQ8TDS7 321 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 DTD1Q8TEA8 209 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 AP1S3Q96PC3 154 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 TXN2Q99757 166 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 WNT5BQ9H1J7 359 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 DOK5Q9P104 306 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CHCHD2Q9Y6H1 151 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CTXND1A0A1B0GTU2 59 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CRYAAP02489 173 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 NPBWR2P48146 333 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 SPINK9Q5DT21 86 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 LHFPL1Q86WI0 220 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 DEFB108BQ8NET1 73 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 MRPL30Q8TCC3 161 aaKnown RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 SLC35E1Q96K37 410 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 SRXN1Q9BYN0 137 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF586Q9NXT0 402 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 COL4A4P53420 1690 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CEP250Q9BV73 2442 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 IGLV3-12A0A075B6K2 115 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CXorf65A6NEN9 183 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 PGLYRP1O75594 196 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 TNFSF15O95150 251 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CYB5R3P00387 301 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 APOA2P02652 100 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 MAGEA5P43359 124 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CD81P60033 236 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 SUPT4H1P63272 117 aaKnown RBP5.77□□□□□ -1.49
CSDE1-205ENST00000438362 PLGLAQ15195 96 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 FAM78BQ5VT40 261 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF880Q6PDB4 577 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 ABHD5Q8WTS1 349 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 GPR146Q96CH1 333 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 ANAPC16Q96DE5 110 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 POM121Q96HA1 1249 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CYTL1Q9NRR1 136 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 RPH3ALQ9UNE2 315 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 CLDN16Q9Y5I7 305 aa5.77□□□□□ -1.49
CSDE1-205ENST00000438362 IGHV3-43A0A0B4J1X8 118 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 C11orf94C9JXX5 98 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 AQP7O14520 342 aa5.76□□□□□ -1.49
CSDE1-205ENST00000438362 IGHV3-43DP0DP04 118 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms