RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ESCO2Q56NI9 601 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 BTN2A1Q7KYR7 527 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 IL1F10Q8WWZ1 152 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 OCEL1Q9H607 264 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 TAS2R3Q9NYW6 316 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 APCP25054 2843 aa19.01■□□□□ 0.63
CPSF4-204ENST00000436336 IGHV4-30-2A0A087WSY4 118 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 TRBV6-7A0A0A0MS04 114 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 BET1O15155 118 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 IL2RGP31785 369 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 TMEM200BQ69YZ2 307 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 DHRS11Q6UWP2 260 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 IDO2Q6ZQW0 420 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 OR6F1Q8NGZ6 308 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 OR1L1Q8NH94 360 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 RAB39BQ96DA2 213 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 CALYQ9NYX4 217 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 ABCA12Q86UK0 2595 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 KBTBD11-OT1A0A1B0GTJ5 212 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 NPIPB11E5RHQ5 1161 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 LMO4P61968 165 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 ZNF273Q14593 569 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 C17orf58Q2M2W7 97 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 ZNF660Q6AZW8 331 aaPredicted RBP19■□□□□ 0.63
CPSF4-204ENST00000436336 FAM185AQ8N0U4 392 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 CENPSQ8N2Z9 138 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 OR10J5Q8NHC4 309 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 C8orf46Q8TAG6 207 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 UBALD1Q8TB05 177 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 MALRD1Q5VYJ5 2156 aa19■□□□□ 0.63
CPSF4-204ENST00000436336 SPNP16150 400 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 SLC25A16P16260 332 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 RBMS2Q15434 407 aaKnown RBP18.99■□□□□ 0.63
CPSF4-204ENST00000436336 CCBE1Q6UXH8 406 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-204ENST00000436336 LHFPL1Q86WI0 220 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 GIMAP1Q8WWP7 306 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 GINS4Q9BRT9 223 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 ZNF2Q9BSG1 426 aaPredicted RBP18.99■□□□□ 0.63
CPSF4-204ENST00000436336 GAL3ST2Q9H3Q3 398 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 LINC00574Q9H8X3 128 aa18.99■□□□□ 0.63
CPSF4-204ENST00000436336 TCRBP04435 133 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 FCGR2CP31995 323 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 HTD2P86397 168 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 CD276Q5ZPR3 534 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 GLCCI1Q86VQ1 547 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 TERB2Q8NHR7 220 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 RFESDQ8TAC1 157 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 ZNF714Q96N38 554 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 SLC25A21Q9BQT8 299 aaPredicted RBP18.98■□□□□ 0.63
CPSF4-204ENST00000436336 SLC23A1Q9UHI7 598 aa18.98■□□□□ 0.63
CPSF4-204ENST00000436336 RPUSD1Q9UJJ7 312 aaKnown RBP18.98■□□□□ 0.63
CPSF4-204ENST00000436336 F2RL2O00254 374 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 PHF1O43189 567 aaPredicted RBP18.97■□□□□ 0.63
CPSF4-204ENST00000436336 NDUFB6O95139 128 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 ZBTB25P24278 435 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 PLET1Q6UQ28 207 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 OR13C8Q8NGS7 320 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 HSPA12AO43301 675 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 HEXAP06865 529 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 NFYAP23511 347 aaPredicted RBP18.97■□□□□ 0.63
CPSF4-204ENST00000436336 OR1A1Q9P1Q5 309 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 NUBP2Q9Y5Y2 271 aa18.97■□□□□ 0.63
CPSF4-204ENST00000436336 IGHV4-61A0A0C4DH41 118 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 A0A1W2PPH5 198 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 A8MXK9 166 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 ZNF728P0DKX0 622 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 TMEM30BQ3MIR4 351 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 AADACL3Q5VUY0 350 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 PRSS57Q6UWY2 283 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 H1FOOQ8IZA3 346 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-204ENST00000436336 LY6G5BQ8NDX9 201 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 MRGPRFQ96AM1 343 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 TMPRSS13Q9BYE2 586 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 TOLLIPQ9H0E2 274 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 MMP28Q9H239 520 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 JPT1Q9UK76 154 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 POLQO75417 2590 aa18.96■□□□□ 0.63
CPSF4-204ENST00000436336 LOC105371242A0A075B767 164 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 PPIAL4CA0A0B4J2A2 164 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 TUSC2O75896 110 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 PPIAL4GP0DN37 164 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 CCL3L1P16619 93 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 FPR2P25090 351 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 ECI1P42126 302 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 OR10A7Q8NGE5 316 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 OR52L2PQ8NGH6 319 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 OR2S2Q9NQN1 319 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 IDI2-AS1Q9NZ38 188 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 ZNF69Q9UC07 566 aa18.95■□□□□ 0.62
CPSF4-204ENST00000436336 OR5H14A6NHG9 310 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 KIAA1324LA8MWY0 1029 aaPredicted RBP18.94■□□□□ 0.62
CPSF4-204ENST00000436336 C22orf46C9J442 243 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 PPYP01298 95 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 OMGP23515 440 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 CEACAM6P40199 344 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 Q5PR19 223 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 C20orf85Q9H1P6 137 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 NUDT15Q9NV35 164 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 CSMD2Q7Z408 3487 aa18.94■□□□□ 0.62
CPSF4-204ENST00000436336 LIPFP07098 398 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms