RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CLN3Q13286 438 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 P4HA3Q7Z4N8 544 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 UBALD1Q8TB05 177 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 GTF3AQ92664 365 aaKnown RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 GNPNAT1Q96EK6 184 aaPredicted RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 COLQQ9Y215 455 aaPredicted RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 MPC1Q9Y5U8 109 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 DEGS1O15121 323 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 IL18BPO95998 194 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 MMP9P14780 707 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 S100GP29377 79 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 RPS23P62266 143 aaKnown RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 HLA-DRB3P79483 266 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 TMEM267Q0VDI3 215 aaPredicted RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 RNPS1Q15287 305 aaKnown RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 AKR1C8PQ5T2L2 129 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 Q6ZRM9 215 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 LINC00596Q86U02 117 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 H1FOOQ8IZA3 346 aaPredicted RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 RNASE11Q8TAA1 199 aaKnown RBP10.04□□□□□ -0.8
CD44-209ENST00000433892 ATP5SQ99766 215 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 OPA3Q9H6K4 179 aa10.04□□□□□ -0.8
CD44-209ENST00000433892 IGHV3-64DA0A0J9YX35 117 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 OR5B21A6NL26 309 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 H3BQ15 152 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 OR2C1O95371 312 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 MEOX1P50221 254 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 IL24Q13007 206 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 DBX2Q6ZNG2 339 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 ZNF295-AS1Q8N0V1 137 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
CD44-209ENST00000433892 GUCD1Q96NT3 240 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 OR51I2Q9H344 312 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 KIAA1456Q9P272 454 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 PPP1R3CQ9UQK1 317 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 MED12LQ86YW9 2145 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 KMT2EQ8IZD2 1858 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 TECTAO75443 2155 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 TRBV6-6A0A0A6YYG2 114 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 UBE2CO00762 179 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 MT-CO3P00414 261 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 MPLP40238 635 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 FABP9Q0Z7S8 132 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 SLC25A24Q6NUK1 477 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 ZNF880Q6PDB4 577 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 MDP1Q86V88 176 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 STX12Q86Y82 276 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 THNSL2Q86YJ6 484 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 OR10V1Q8NGI7 309 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 GPR87Q9BY21 358 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 IL17BQ9UHF5 180 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 ZFHX4Q86UP3 3567 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 BDP1A6H8Y1 2624 aa10.03□□□□□ -0.8
CD44-209ENST00000433892 A0A1B0GU03 582 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 BTBD17A6NE02 478 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 H0YL77 283 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 SIRPB1O00241 398 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 ATXN7O15265 892 aaPredicted RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 IGKV1-39P01597 117 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 IGLV2-14P01704 120 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 IGKV1D-39P04432 117 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 SP1P08047 785 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 SRP19P09132 144 aaKnown RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 ICAM4Q14773 271 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 TMEM164Q5U3C3 297 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 Q6P435 159 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 SLC16A13Q7RTY0 426 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 CYB561D1Q8N8Q1 229 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 OR1K1Q8NGR3 316 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 CABLES2Q9BTV7 478 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 DEFB127Q9H1M4 99 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 CACNG5Q9UF02 275 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 A0A1W2PR80 420 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 LNP1A1A4G5 178 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 C21orf140B9A014 251 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 TXNL1O43396 289 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 CEACAM1P13688 526 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 ZNF16P17020 682 aaPredicted RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 TAS2R30P59541 319 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 RPL23AP62750 156 aaKnown RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 TLE4Q04727 773 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 TESK1Q15569 626 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 SP5Q6BEB4 398 aaPredicted RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 MYPOPQ86VE0 399 aaPredicted RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 NANPQ8TBE9 248 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 RAB39BQ96DA2 213 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 PKIBQ9C010 78 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 IFT22Q9H7X7 185 aa10.02□□□□□ -0.81
CD44-209ENST00000433892 RBM7Q9Y580 266 aaKnown RBP10.02□□□□□ -0.81
CD44-209ENST00000433892 ARHGAP21Q5T5U3 1957 aa10.01□□□□□ -0.81
CD44-209ENST00000433892 J3QT63 122 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms