RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ICOSQ9Y6W8 199 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 MYO16Q9Y6X6 1858 aa1.51□□□□□ -2.17
PTPN4-205ENST00000433888 PTPRKQ15262 1439 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 IGHV1-45A0A0A0MS14 117 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 IGKV1-12A0A0C4DH73 117 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF98A6NK75 572 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PCNX2A6NKB5 2137 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF729A6NN14 1252 aaPredicted RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 B4DEV8 164 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 C4orf51C9J302 202 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 F5H5P2 479 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 K7EPK0 472 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 BET1O15155 118 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 ZW10O43264 779 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 TGOLN2O43493 480 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SYNGR1O43759 233 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SLC37A4O43826 429 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SOX14O95416 240 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 LHBP01229 141 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 IGKV1D-12P01611 117 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 IGHV1-46P01743 117 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 RPS17P08708 135 aaKnown RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SNRPAP09012 282 aaKnown RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PRPS1L1P21108 318 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PSMA1P25786 263 aaKnown RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 ANP32AP39687 249 aaKnown RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 TCL1AP56279 114 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 KLF3P57682 345 aaPredicted RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 UBE2IP63279 158 aaKnown RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 BSPH1Q075Z2 132 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 TSPAN31Q12999 210 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PDGFRLQ15198 375 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 GOLGA7BQ2TAP0 167 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PDZD11Q5EBL8 140 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SAPCD1Q5SSQ6 148 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 LDLRAD2Q5SZI1 272 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 CCDC122Q5T0U0 273 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 FAM162BQ5T6X4 162 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 CST9Q5W186 159 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 DNM1P34Q6PK57 102 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 NAA40Q86UY6 237 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 AMN1Q8IY45 258 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SLC25A45Q8N413 288 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SPANXA2-OT1Q8N9U9 137 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 OR51D1Q8NGF3 324 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 OR8J2Q8NGG1 315 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 OR4C13Q8NGP0 309 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 OR1P1Q8NH06 330 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 CYGBQ8WWM9 190 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PPWD1Q96BP3 646 aaKnown RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 TESCQ96BS2 214 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SMIM19Q96E16 107 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 SMIM12Q96EX1 92 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PEBP4Q96S96 227 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 TIPINQ9BVW5 301 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 FGFR1OP2Q9NVK5 253 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 C3orf18Q9UK00 162 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 TP53TG1Q9Y2A0 90 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 S4R3C0 116 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 U3KQK5 164 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 AHDC1Q5TGY3 1603 aaPredicted RBP1.5□□□□□ -2.17
PTPN4-205ENST00000433888 MYO15BQ96JP2 1530 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PLA2R1Q13018 1463 aa1.5□□□□□ -2.17
PTPN4-205ENST00000433888 PTPRTO14522 1441 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 EVC2Q86UK5 1308 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 YLPM1P49750 1951 aaKnown RBP1.49□□□□□ -2.17
PTPN4-205ENST00000433888 IGKV1OR2-108A0A075B7D4 117 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 CD300LBA8K4G0 201 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 MRASO14807 208 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 SLC31A1O15431 190 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 TCF21O43680 179 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 UGT2B11O75310 529 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 HLA-AP01891 365 aaKnown RBP1.49□□□□□ -2.17
PTPN4-205ENST00000433888 TNNC2P02585 160 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 ATP5G1P05496 136 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 S100A6P06703 90 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 OR13C7P0DN81 318 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 HIST1H1CP16403 213 aaKnown RBP1.49□□□□□ -2.17
PTPN4-205ENST00000433888 CD36P16671 472 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 ZNF7P17097 686 aaPredicted RBP1.49□□□□□ -2.17
PTPN4-205ENST00000433888 GADD45AP24522 165 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 MPIP34949 423 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 RSU1Q15404 277 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 HENMT1Q5T8I9 393 aaKnown RBP1.49□□□□□ -2.17
PTPN4-205ENST00000433888 TMEM136Q6ZRR5 245 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 VN1R4Q7Z5H5 301 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 CPNE9Q8IYJ1 553 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 ST20-AS1Q8NBB2 130 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 EEF1AKMT1Q8WVE0 214 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 TNFAIP8L1Q8WVP5 186 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 LINC00477Q96M19 166 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 GLS2Q9UI32 602 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 HDGFL3Q9Y3E1 203 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 KMT2EQ8IZD2 1858 aa1.49□□□□□ -2.17
PTPN4-205ENST00000433888 SHROOM3Q8TF72 1996 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 IGLV3-12A0A075B6K2 115 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 IGHV3-43A0A0B4J1X8 118 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 OR5H14A6NHG9 310 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 C21orf140B9A014 251 aa1.48□□□□□ -2.17
PTPN4-205ENST00000433888 IGLL5B9A064 214 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms