RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 GOLGA8RI6L899 631 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 MFNGO00587 321 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 CALUO43852 315 aaPredicted RBP3.49□□□□□ -1.85
USP54-206ENST00000433394 CXorf1O96002 111 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 PRB2P02812 416 aaPredicted RBP3.49□□□□□ -1.85
USP54-206ENST00000433394 KRT7P08729 469 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 MLNP12872 115 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 ACOT2P49753 483 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 POLR2GP62487 172 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP54-206ENST00000433394 SKP1P63208 163 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 FLOT2Q14254 428 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 ELOCQ15369 112 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 SHHQ15465 462 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 TRAM1Q15629 374 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 MOGQ16653 247 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 BSXQ3C1V8 233 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 STK40Q8N2I9 435 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 OSR2Q8N2R0 312 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 C17orf78Q8N4C9 275 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 ZDHHC22Q8N966 263 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 ACBD4Q8NC06 268 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 OR8A1Q8NGG7 326 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 TEX47Q8TBZ9 253 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 BLNKQ8WV28 456 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 TNFRSF14Q92956 283 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 RMI2Q96E14 147 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 ZMYND19Q96E35 227 aaPredicted RBP3.49□□□□□ -1.85
USP54-206ENST00000433394 ZNF2Q9BSG1 426 aaPredicted RBP3.49□□□□□ -1.85
USP54-206ENST00000433394 TRIM4Q9C037 500 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 SRRQ9GZT4 340 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 SLC22A7Q9Y694 548 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 DDX60LQ5H9U9 1706 aaKnown RBP3.49□□□□□ -1.85
USP54-206ENST00000433394 SBF1O95248 1867 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 SCN1AP35498 2009 aa3.49□□□□□ -1.85
USP54-206ENST00000433394 ELP1O95163 1332 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 TRPC5OSA6NMA1 111 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 IQCF5A8MTL0 148 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 F8VP50 259 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 FABP7O15540 132 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 CRXO43186 299 aaPredicted RBP3.48□□□□□ -1.85
USP54-206ENST00000433394 TRAPPC3O43617 180 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 COX7A2P2O60397 106 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 SNAP29O95721 258 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 NRASP01111 189 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 HRASP01112 189 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 KRASP01116 189 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 LHBP01229 141 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 SCGB1C2P0DMR2 95 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 IDO1P14902 403 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 PRTN3P24158 256 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 HLA-DMAP28067 261 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 S100A12P80511 92 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 OR4D1Q15615 310 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 CLVS2Q5SYC1 327 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 AHSA2Q719I0 299 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 MRPL52Q86TS9 123 aaKnown RBP3.48□□□□□ -1.85
USP54-206ENST00000433394 SCGB1C1Q8TD33 95 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 CASTOR1Q8WTX7 329 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 YIPF5Q969M3 257 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 DERL3Q96Q80 235 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 SPACA5Q96QH8 159 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 ZNF649Q9BS31 505 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 DRC3Q9H069 523 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 OR52A5Q9H2C5 316 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 OR2S2Q9NQN1 319 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 TAC3Q9UHF0 121 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 SCN4AP35499 1836 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 SRCAPQ6ZRS2 3230 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 ANKRD12Q6UB98 2062 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 MYH6P13533 1939 aa3.48□□□□□ -1.85
USP54-206ENST00000433394 NRCAMQ92823 1304 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 OR6C70A6NIJ9 312 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 OR5K4A6NMS3 321 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 RNASEK-C17orf49H0YIS7 233 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 UPK1AO00322 258 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 IGLV7-43P04211 117 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 NQO2P16083 231 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 CFL1P23528 166 aaKnown RBP3.47□□□□□ -1.85
USP54-206ENST00000433394 CD40LGP29965 261 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 GTF2H1P32780 548 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 RAB25P57735 213 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 STX5Q13190 355 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 MOBPQ13875 183 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 SSX1Q16384 188 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 SP6Q3SY56 376 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 ZNF404Q494X3 552 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 DNAL1Q4LDG9 190 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 ACTBL2Q562R1 376 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 TMEM31Q5JXX7 168 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 ZNF773Q6PK81 442 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 FA2HQ7L5A8 372 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 GAPTQ8N292 157 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 SPICQ8N5J4 248 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 CDRT4Q8N9R6 151 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 OR6K3Q8NGY3 331 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 FAM57AQ8TBR7 257 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 LZICQ8WZA0 190 aa3.47□□□□□ -1.85
USP54-206ENST00000433394 PPWD1Q96BP3 646 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms