RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CRYGDP07320 174 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 CD37P11049 281 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 ZNF708P17019 499 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 CXCL3P19876 107 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 USF1P22415 310 aaPredicted RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 HIST1H1TP22492 207 aaPredicted RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 SLC2A5P22732 501 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PAX6P26367 422 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 AK4P27144 223 aaPredicted RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 RPA3P35244 121 aaPredicted RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 ARL2P36404 184 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 GZMMP51124 257 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 SUB1P53999 127 aaKnown RBP eCLIP1.87□□□□□ -2.11
CLK1-204ENST00000432425 DLX1P56177 255 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 RAB38P57729 211 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 TCTAP57738 103 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 OR8G1Q15617 311 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 NSUN5P1Q3KNT7 163 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 SLC25A35Q3KQZ1 300 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PARP15Q460N3 678 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 RNASE10Q5GAN6 216 aaKnown RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 N4BP2L1Q5TBK1 243 aaPredicted RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 PLET1Q6UQ28 207 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 ALKAL1Q6UXT8 129 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 TMEM61Q8N0U2 210 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 GAPTQ8N292 157 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 OSR2Q8N2R0 312 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 SVOPLQ8N434 492 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PNKDQ8N490 385 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 OR9I1Q8NGQ6 314 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 OR4X1Q8NH49 305 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PYROXD1Q8WU10 500 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 TMEM203Q969S6 136 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 DIRAS2Q96HU8 199 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PYURFQ96I23 114 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PGLYRP4Q96LB8 373 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 MARVELD1Q9BSK0 173 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 TBL1XR1Q9BZK7 514 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 MAP1LC3BQ9GZQ8 125 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PRORYQ9H606 182 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 HMG20AQ9NP66 347 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 EXOSC4Q9NPD3 245 aaKnown RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 DOK5Q9P104 306 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 COPZ2Q9P299 210 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 GNG8Q9UK08 70 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 CARHSP1Q9Y2V2 147 aaKnown RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 OR51B2Q9Y5P1 312 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PHIPQ8WWQ0 1821 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PLXND1Q9Y4D7 1925 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 KMT2EQ8IZD2 1858 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 OTOFQ9HC10 1997 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 PIK3C2GO75747 1445 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 FAM135BQ49AJ0 1406 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 FGD6Q6ZV73 1430 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 A0A0G2JLM5 398 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 A0A0G2JRQ6 117 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR5H1A6NKK0 313 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TRAPPC2LH3BP13 241 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 H7C1H1 209 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TNFRSF11BO00300 401 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SLC17A3O00476 420 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF593O00488 134 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 ORC5O43913 435 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR7C1O76099 320 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 FGF1P05230 155 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR5AL1P0C617 328 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 FABP6P51161 128 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF136P52737 540 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 KLF3P57682 345 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 TAS2R43P59537 309 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DEFA1P59665 94 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TBPL1P62380 186 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 RPL18AQ02543 176 aaKnown RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 EMX2Q04743 252 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 BAMBIQ13145 260 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 CLINT1Q14677 625 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SNRNP35Q16560 246 aaKnown RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 HIST3H3Q16695 136 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SPATA31B1PQ5VZV4 182 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DCUN1D2Q6PH85 259 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OPN5Q6U736 354 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 CALHM3Q86XJ0 350 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SNX29P2Q8IUI4 249 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 RDH10Q8IZV5 341 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DAW1Q8N136 415 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 UMODL1-AS1Q8N2C9 162 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF557Q8N988 423 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR4K17Q8NGC6 315 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR4M1Q8NGD0 313 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR52E4Q8NGH9 312 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR2T4Q8NH00 348 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR4S2Q8NH73 311 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PIFOQ8TCI5 191 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SKA2Q8WVK7 121 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 RGP1Q92546 391 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 GALMQ96C23 342 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DDIT4LQ96D03 193 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 EFCAB11Q9BUY7 163 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 RNASE7Q9H1E1 156 aaKnown RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 VSIRQ9H7M9 311 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms