RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 C8orf82Q6P1X6 216 aaPredicted RBP11.88□□□□□ -0.51
NUP50-209ENST00000432340 UNQ5815/PRO19632Q6UWF5 114 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 Q6ZWC4 215 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 NPBQ8NG41 125 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 DYNLRB2Q8TF09 96 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 ARL11Q969Q4 196 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 NUBP2Q9Y5Y2 271 aa11.88□□□□□ -0.51
NUP50-209ENST00000432340 A0A0B4J203 849 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 PRSS29PA6NIE9 313 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 SPRY2O43597 315 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 KRT8P05787 483 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 SLC2A5P22732 501 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 AADACP22760 399 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 CXCR4P61073 352 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 CX3CL1P78423 397 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 PRR20EP86478 221 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 PRR20CP86479 221 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 PRR20DP86480 221 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 PRR20BP86481 221 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 PRR20AP86496 221 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 ODF4Q2M2E3 257 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 APOL4Q9BPW4 351 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 TTTY10Q9BZA0 68 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 REEP1Q9H902 201 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 ZNF355PQ9NSJ1 428 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 GNG12Q9UBI6 72 aa11.87□□□□□ -0.51
NUP50-209ENST00000432340 IGKV1-12A0A0C4DH73 117 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 TMEM30CPA0ZSE6 113 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 PRR32B1ATL7 298 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 ZNF670-ZNF695F2Z2N8 137 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 ORC5O43913 435 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 IGKV1D-12P01611 117 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 UBCP0CG48 685 aaKnown RBP11.86□□□□□ -0.51
NUP50-209ENST00000432340 COX4I1P13073 169 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 ZNF20P17024 532 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 VHLP40337 213 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 MECP2P51608 486 aaKnown RBP11.86□□□□□ -0.51
NUP50-209ENST00000432340 APOC4P55056 127 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 PSME3P61289 254 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 ZNF45Q02386 682 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 GK3PQ14409 553 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 GINS1Q14691 196 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 CDK5R1Q15078 307 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 CD300EQ496F6 205 aaPredicted RBP11.86□□□□□ -0.51
NUP50-209ENST00000432340 CNIH3Q8TBE1 160 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 RAB21Q9UL25 225 aa11.86□□□□□ -0.51
NUP50-209ENST00000432340 SAMHD1Q9Y3Z3 626 aaKnown RBP11.86□□□□□ -0.51
NUP50-209ENST00000432340 ANKRD34BA5PLL1 514 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 UBE2CO00762 179 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 RPP14O95059 124 aaKnown RBP11.85□□□□□ -0.51
NUP50-209ENST00000432340 NDUFA3O95167 84 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 MAGEA2P43356 314 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 NDPQ00604 133 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 IL13RA2Q14627 380 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 BBS1Q8NFJ9 593 aa11.85□□□□□ -0.51
NUP50-209ENST00000432340 CPNE2Q96FN4 548 aaPredicted RBP11.85□□□□□ -0.51
NUP50-209ENST00000432340 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
NUP50-209ENST00000432340 PEF1Q9UBV8 284 aaKnown RBP11.85□□□□□ -0.51
NUP50-209ENST00000432340 TRAV24A0A0B4J272 114 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 IGKV1-9A0A0C4DH69 117 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 ZNF785A8K8V0 405 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 SPINT2O43291 252 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 MITFO75030 526 aaPredicted RBP11.84□□□□□ -0.51
NUP50-209ENST00000432340 TMEM225BP0DP42 221 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
NUP50-209ENST00000432340 PLEKHG7Q6ZR37 379 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 POC5Q8NA72 575 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 OR10G2Q8NGC3 310 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 C2CD4CQ8TF44 421 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 FBLIM1Q8WUP2 373 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 RFT1Q96AA3 541 aa11.84□□□□□ -0.51
NUP50-209ENST00000432340 V9GYY5 206 aaPredicted RBP11.84□□□□□ -0.51
NUP50-209ENST00000432340 LOC107986453A0A1B0GWG9 222 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 MSGN1A6NI15 193 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 XRCC3O43542 346 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 MT-ND2P03891 347 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 ELP2Q6IA86 826 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 OR5D18Q8NGL1 313 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 RDH12Q96NR8 316 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 WFDC10AQ9H1F0 79 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 NDE1Q9NXR1 346 aa11.83□□□□□ -0.52
NUP50-209ENST00000432340 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 RRHO14718 337 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 MAP2K4P45985 399 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 MNAT1P51948 309 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 RBMS2Q15434 407 aaKnown RBP11.82□□□□□ -0.52
NUP50-209ENST00000432340 TMEM177Q53S58 311 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 TMEM244Q5VVB8 128 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 SLC35F2Q8IXU6 374 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 GVQW1Q8N7I0 195 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 LFNGQ8NES3 379 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 PLPPR1Q8TBJ4 325 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 NR1H4Q96RI1 486 aaPredicted RBP11.82□□□□□ -0.52
NUP50-209ENST00000432340 NIPSNAP1Q9BPW8 284 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 DPCDQ9BVM2 203 aaPredicted RBP11.82□□□□□ -0.52
NUP50-209ENST00000432340 ZNF556Q9HAH1 456 aa11.82□□□□□ -0.52
NUP50-209ENST00000432340 MBNL3Q9NUK0 354 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms