RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 TM2D1Q9BX74 207 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 GABARAPL1Q9H0R8 117 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 SRMSQ9H3Y6 488 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 IKZF5Q9H5V7 419 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF160Q9HCG1 818 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 RASL12Q9NYN1 266 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 ADA2Q9NZK5 511 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 DPM3Q9P2X0 92 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 MARCOQ9UEW3 520 aaPredicted RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 POFUT2Q9Y2G5 429 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 V9GYS6 101 aa3.18□□□□□ -1.9
HMGB3-203ENST00000430118 FLNAP21333 2647 aaKnown RBP3.18□□□□□ -1.9
HMGB3-203ENST00000430118 FBN1P35555 2871 aaKnown RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 NCOA6Q14686 2063 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 A0A087WUJ7 227 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 LOC100130705A0A1B0GUX0 176 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 A0A1B0GV72 72 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 TCRBV9S1A1TA0A576 114 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 C9JVG2 144 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 E9PLD3 99 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 G3V3Q6 166 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 H7C423 109 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 GFYI3L273 518 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 UPK1AO00322 258 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 CDIPTO14735 213 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OR2T1O43869 369 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ALOX12BO75342 701 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 SH3BGRLO75368 114 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 DIRAS1O95057 198 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 RENP00797 406 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 IGF2P01344 180 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 GKN3PP0CG01 181 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 IL1RNP18510 177 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PGAM1P18669 254 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 BCL3P20749 454 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 IGHV1-2P23083 117 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 KDELR1P24390 212 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 GADD45AP24522 165 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 HTR2CP28335 458 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PRDX3P30048 256 aaKnown RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 FGF9P31371 208 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 MARCKSL1P49006 195 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 HCCSP53701 268 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 EMP2P54851 167 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 LSM6P62312 80 aaKnown RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PPP3R1P63098 170 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 MRPS10P82664 201 aaKnown RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OC90Q02509 493 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PAX8Q06710 450 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ST3GAL3Q11203 375 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 SKP2Q13309 424 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 IL18Q14116 193 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 CRMP1Q14194 572 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ABRAXAS2Q15018 415 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 HMGN3Q15651 99 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 IMPG1Q17R60 797 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 C5orf64Q2M2E5 130 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 XKR7Q5GH72 579 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 C9orf135Q5VTT2 229 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 RUSC1-AS1Q66K80 236 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ABHD13Q7L211 337 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ABHD12BQ7Z5M8 362 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 DOLPP1Q86YN1 238 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 Q8N377 158 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 FGFRL1Q8N441 504 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 FTMTQ8N4E7 242 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 SPICQ8N5J4 248 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 BPIFCQ8NFQ6 507 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OR11H7Q8NGC8 314 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OR13C8Q8NGS7 320 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OR6K3Q8NGY3 331 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OR2G2Q8NGZ5 317 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OR4Q3Q8NH05 313 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 FAM57AQ8TBR7 257 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 VN1R17PQ8TDU5 208 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 RXFP2Q8WXD0 754 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 GHSRQ92847 366 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 HIST1H2BAQ96A08 127 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PACRGQ96M98 296 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 MS4A4EQ96PG1 132 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 CLCC1Q96S66 551 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 MBOAT4Q96T53 435 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 S100A13Q99584 98 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PITX2Q99697 317 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 AIF1LQ9BQI0 150 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 GINS4Q9BRT9 223 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 C1QTNF6Q9BXI9 259 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 IL22Q9GZX6 179 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ABCB9Q9NP78 766 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ACP6Q9NPH0 428 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 SPRR3Q9UBC9 169 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PEF1Q9UBV8 284 aaKnown RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF282Q9UDV7 671 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ZNF629Q9UEG4 869 aaPredicted RBP3.17□□□□□ -1.9
HMGB3-203ENST00000430118 OPN4Q9UHM6 478 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 PSG11Q9UQ72 335 aa3.17□□□□□ -1.9
HMGB3-203ENST00000430118 ZFP30Q9Y2G7 519 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms