RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 WASHC3Q9Y3C0 194 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 SPTBP11277 2137 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 HEATR5BQ9P2D3 2071 aa7.64□□□□□ -1.19
CDC42BPA-206ENST00000429440 KIAA2026Q5HYC2 2103 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 TMEM189A5PLL7 270 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 H0YJW9 148 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 CCL16O15467 120 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 MLNRO43193 412 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ISG15P05161 165 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 CLEC3BP05452 202 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 LINC00869P0C866 280 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 CCL2P13500 99 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 PTGER1P34995 402 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 DYNLT3P51808 116 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 RPS4XP62701 263 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 RUNX1Q01196 453 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ROM1Q03395 351 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 DUSP2Q05923 314 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 IGF2-ASQ6U949 168 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF765Q7L2R6 523 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 LYZL2Q7Z4W2 148 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 LIN37Q96GY3 246 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 DERL1Q9BUN8 251 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 KIAA0100Q14667 2235 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 K7EQM0 130 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 SDCBPO00560 298 aaPredicted RBP7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF737O75373 536 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 RHBDL1O75783 438 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 NUDT3O95989 172 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF728P0DKX0 622 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 UCP1P25874 307 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 AMTP48728 403 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 RRADP55042 308 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 GPM6BQ13491 265 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR10J3Q5JRS4 329 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 PLAC9Q5JTB6 97 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 LCN15Q6UWW0 184 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 ASCL4Q6XD76 172 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 Q6ZVL8 140 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 SYT13Q7L8C5 426 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 PLPPR1Q8TBJ4 325 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 FAM103A1Q9BTL3 118 aaKnown RBP7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 WNT10AQ9GZT5 417 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 BANF2Q9H503 90 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 NAA60Q9H7X0 242 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 NPVFQ9HCQ7 196 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 SPACA6W5XKT8 324 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 XIRP2A4UGR9 3374 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 KIF26BQ2KJY2 2108 aa7.63□□□□□ -1.19
CDC42BPA-206ENST00000429440 A0A0G2JMM0 328 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 LOC102725191A0A1B0GVB3 256 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 A0A1W2PPB8 328 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 KIR3DP1A8MWS1 328 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 LAMTOR5O43504 91 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 IGLL1P15814 213 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 SNU13P55769 128 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 PLP1P60201 277 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MEP1BQ16820 701 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 PRTGQ2VWP7 1150 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 TMEM249Q2WGJ8 235 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 LILRA3Q8N6C8 439 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 CACNG8Q8WXS5 425 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 KCNS1Q96KK3 526 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 TSSK2Q96PF2 358 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 RBM24Q9BX46 236 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 SRA1Q9HD15 236 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 CES1P1Q9UKY3 287 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 RARRES3Q9UL19 164 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 POLR1DQ9Y2S0 133 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 TCF20Q9UGU0 1960 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 KIAA1549LQ6ZVL6 1849 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 TRBV9A0A0B4J1U6 114 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MUC21A0A0G2JKD1 596 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MUC21A0A140T8X8 626 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR2AG2A6NM03 316 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 CMPK1P30085 196 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 SSR2P43308 183 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF83P51522 516 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 SSBP2P81877 361 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MRPS34P82930 218 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 SERF2P84101 59 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZP4Q12836 540 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF726P1Q15940 193 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 IGFBP7Q16270 282 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 EMC4Q5J8M3 183 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MUC21Q5SSG8 566 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 RTN4RL2Q86UN3 420 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 OR10V1Q8NGI7 309 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MRPL30Q8TCC3 161 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 NINJ1Q92982 152 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 IRF7Q92985 503 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 CHRDL1Q9BU40 450 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 MRPL18Q9H0U6 180 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 ST20Q9HBF5 79 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 SLC7A10Q9NS82 523 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 FGF21Q9NSA1 209 aa7.62□□□□□ -1.19
CDC42BPA-206ENST00000429440 GAGE12HA6NDE8 117 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 GLOD5A6NK44 160 aa7.61□□□□□ -1.19
CDC42BPA-206ENST00000429440 ZNF716A6NP11 495 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms