RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 C20orf144Q9BQM9 153 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 C5orf66Q9H5L9 145 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 GLRX2Q9NS18 164 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 GPR173Q9NS66 373 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 CBLN4Q9NTU7 201 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 FBLN5Q9UBX5 448 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 HIVEP3Q5T1R4 2406 aa9.81□□□□□ -0.84
CECR3-201ENST00000428828 PRSS37A4D1T9 235 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 NPIPB13A6NJU9 1138 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 NPIPB4C9JG80 1138 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 SOX15O60248 233 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 RPP14O95059 124 aaKnown RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 RENP00797 406 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 TMEM11P17152 192 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 HRH1P35367 487 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 TIMP3P35625 211 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 CSNK1A1P48729 337 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 PHYHD1Q5SRE7 291 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 FAM219AQ8IW50 185 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 TMEM123Q8N131 208 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 CPEB3Q8NE35 698 aaKnown RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 OR6K6Q8NGW6 343 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 MARCH1Q8TCQ1 289 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 TMEM45BQ96B21 275 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 APH1AQ96BI3 265 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 KCNK17Q96T54 332 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 METTL8Q9H825 291 aaKnown RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 MSL2Q9HCI7 577 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 PRSS50Q9UI38 385 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 A0A0G2JNJ9 132 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 E5RGE8 158 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 E9PLN8 166 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 CIDEAO60543 219 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 CYB5R3P00387 301 aaPredicted RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 PPBPP02775 128 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 CSN2P05814 226 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 BMP5P22003 454 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 KIR2DL2P43627 348 aaPredicted RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 RANP62826 216 aaKnown RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 HLA-DRB3P79483 266 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 NCOA6Q14686 2063 aaPredicted RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 ANKRD55Q3KP44 614 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 TSPO2Q5TGU0 170 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 C9orf135Q5VTT2 229 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 TEX38Q6PEX7 206 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 FBXW12Q6X9E4 464 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 LYPD6Q86Y78 171 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 OR4X1Q8NH49 305 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 ZNF462Q96JM2 2506 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 VKORC1Q9BQB6 163 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 SRA1Q9HD15 236 aaKnown RBP9.8□□□□□ -0.84
CECR3-201ENST00000428828 Q9UFV3 132 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 NSG2Q9Y328 171 aa9.8□□□□□ -0.84
CECR3-201ENST00000428828 IGKV1D-43A0A0B4J1Z2 117 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 SIAH2O43255 324 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 GPR137BO60478 399 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 SLC16A7O60669 478 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 TNFSF13O75888 250 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 ALOX5APP20292 161 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 OR10J1P30954 320 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 CEACAM8P31997 349 aaPredicted RBP9.79□□□□□ -0.84
CECR3-201ENST00000428828 KLF3P57682 345 aaPredicted RBP9.79□□□□□ -0.84
CECR3-201ENST00000428828 S100A10P60903 97 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 SELENOTP62341 195 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 GUSBP1Q15486 140 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 COL5A1-AS1Q5SY13 56 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 GLYATL3Q5SZD4 288 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 OTPQ5XKR4 325 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 NCR3LG1Q68D85 454 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 LHFPL1Q86WI0 220 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 SEMA6DQ8NFY4 1073 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 SLC26A10Q8NG04 563 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 OR10AC1Q8NH08 325 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 TSEN15Q8WW01 171 aaKnown RBP9.79□□□□□ -0.84
CECR3-201ENST00000428828 RND1Q92730 232 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 FAM46BQ96A09 425 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 FGGYQ96C11 551 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
CECR3-201ENST00000428828 MRPL13Q9BYD1 178 aaKnown RBP9.79□□□□□ -0.84
CECR3-201ENST00000428828 ULBP2Q9BZM5 246 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 WDR76Q9H967 626 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 GP6Q9HCN6 339 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 SLC7A10Q9NS82 523 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 PROCRQ9UNN8 238 aa9.79□□□□□ -0.84
CECR3-201ENST00000428828 HSBP1L1C9JCN9 74 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 PRH1P02810 166 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 TMEM225BP0DP42 221 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 CTLA4P16410 223 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 CTSSP25774 331 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 ASPHD2Q6ICH7 369 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 TMEM211Q6ICI0 200 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 C20orf196Q8IYI0 205 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 OR51A4Q8NGJ6 313 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 OR13C9Q8NGT0 318 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 TMEM54Q969K7 222 aa9.78□□□□□ -0.84
CECR3-201ENST00000428828 RBMXL1Q96E39 390 aaKnown RBP9.78□□□□□ -0.84
CECR3-201ENST00000428828 MIEN1Q9BRT3 115 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms