RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 HLA-DOBP13765 273 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 NOVP48745 357 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 DYNLT3P51808 116 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SSX8Q7RTT4 187 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 RPS4Y2Q8TD47 263 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 RSG1Q9BU20 258 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ST6GALNAC2Q9UJ37 374 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 FTH1P19P0C7X4 201 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 LY6G5CQ5SRR4 150 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ADAM20O43506 726 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 KLK8O60259 260 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 NRASP01111 189 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 KRASP01116 189 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PLAURQ03405 335 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SLCO4C1Q6ZQN7 724 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR8B3Q8NGG8 313 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE12JA6NER3 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE7O76087 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CER1O95813 267 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 IGHG1P01857 330 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE12FP0CL80 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE12GP0CL81 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE12IP0CL82 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE4Q13068 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 EMC4Q5J8M3 183 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PELI1Q96FA3 418 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GPR27Q9NS67 375 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 EMC9Q9Y3B6 208 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TAX1BP3O14907 124 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SCAMP4Q969E2 229 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GNPNAT1Q96EK6 184 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 DNAJC13O75165 2243 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 M0QXV9 152 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CEACAM5P06731 702 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 FURINP09958 794 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 WFDC2Q14508 124 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SAMD5Q5TGI4 173 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 KREMEN2Q8NCW0 462 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CD300LBA8K4G0 201 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF775Q96BV0 537 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TRAV8-6A0A0B4J262 113 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 KBTBD11-OT1A0A1B0GTJ5 212 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ETHE1O95571 254 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 NUP43Q8NFH3 380 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CLDND2Q8NHS1 167 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM189A5PLL7 270 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 MT-CO3P00414 261 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CDCP2Q5VXM1 449 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR5B3Q8NH48 314 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF703Q9H7S9 590 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PLXNA1Q9UIW2 1896 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 A0A0G2JLM5 398 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM229AB2RXF0 380 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CHEK1O14757 476 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 CLDN17P56750 224 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR4C11Q6IEV9 310 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 FGF13Q92913 245 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 WNT6Q9Y6F9 365 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PTPRFP10586 1907 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 B9A039 149 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 VENTXO95231 258 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SPINT3P49223 89 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR5AN1Q8NGI8 311 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR2K2Q8NGT1 345 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF296Q8WUU4 475 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 FAM131CQ96AQ9 280 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM59Q9BXS4 323 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 C19orf25Q9UFG5 118 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 APOBEC3AP31941 199 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF331Q9NQX6 463 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 IL17CQ9P0M4 197 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 HSPB1P04792 205 aaKnown RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ERGP11308 486 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR5A2Q8NGI9 324 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SLC25A22Q9H936 323 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 MPDZO75970 2070 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 A0A1W2PPV4 95 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PAGE4O60829 102 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 DLX2Q07687 328 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR10G8Q8NGN5 311 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GABRG3Q99928 467 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GNB4Q9HAV0 340 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GPR84Q9NQS5 396 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 LRIT1Q9P2V4 623 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 Q9Y3F1 56 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 LOC107986453A0A1B0GWG9 222 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 PRTFDC1Q9NRG1 225 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ANK1P16157 1881 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ABHD16AO95870 558 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 SEC11BP0C7V7 166 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 EGR1P18146 543 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE5Q13069 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 GAGE6Q13070 117 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 HOGA1Q86XE5 327 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR5C1Q8NGR4 320 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF418Q8TF45 676 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF840PA6NDX5 716 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 RPL36A-HNRNPH2H7BZ11 118 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 HOXB2P14652 356 aa2.98□□□□□ -1.93
SYNE1-212ENST00000423061 OR1Q1Q15612 314 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms