RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 HIST1H2BNQ99877 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 HIST1H2BMQ99879 126 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 C1QTNF5Q9BXJ0 243 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 PPP1R2P9O14990 202 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 F2RP25116 425 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 PAX9P55771 341 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 FOXO1Q12778 655 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 OR10J5Q8NHC4 309 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF552Q9H707 407 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 RPRMQ9NS64 109 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 DEPPQ9NTK1 212 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 LRFN1Q9P244 771 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 ATP23Q9Y6H3 246 aa12.97□□□□□ -0.33
SEMA3B-203ENST00000419007 IL24Q13007 206 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 RIPPLY2Q5TAB7 128 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 ZNF787Q6DD87 383 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 OR2T2Q6IF00 324 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 PPP1R3CQ9UQK1 317 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 EP300Q09472 2414 aaPredicted RBP12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 DFFBO76075 338 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 MAS1LP35410 378 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 GLIPR1P48060 266 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 KRTAP27-1Q3LI81 207 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 LURAP1LQ8IV03 231 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 OR8G5Q8NG78 346 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 CACNG5Q9UF02 275 aa12.96□□□□□ -0.33
SEMA3B-203ENST00000419007 IGHV3-64DA0A0J9YX35 117 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 PINLYPA6NC86 204 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 ELLP55199 621 aaPredicted RBP12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 LILRB2Q8N423 598 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 OR5D13Q8NGL4 314 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 S100PBPQ96BU1 408 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 PRRG4Q9BZD6 226 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 PRDM14Q9GZV8 571 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 KCNS2Q9ULS6 477 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 RNF115Q9Y4L5 304 aa12.96□□□□□ -0.34
SEMA3B-203ENST00000419007 ARHGAP21Q5T5U3 1957 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 LRRC3CA6NJW4 275 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 H0Y980 276 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 KHDC3LQ587J8 217 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 ABLIM2Q6H8Q1 611 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 SPINK14Q6IE38 97 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 UBALD2Q8IYN6 164 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 OR1K1Q8NGR3 316 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 CLDN23Q96B33 292 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 A0A087WWC5 75 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 PATE3B3GLJ2 98 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 CEACAM21Q3KPI0 293 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 Q6ZRM9 215 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 SPSB4Q96A44 273 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM210BQ96KR6 192 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 PLK3Q9H4B4 646 aa12.95□□□□□ -0.34
SEMA3B-203ENST00000419007 ARGFXA6NJG6 315 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 CEBPZOSA8MTT3 80 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 NDUFS6O75380 124 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 TUSC2O75896 110 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 CYC1P08574 325 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 FABP4P15090 132 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 SLC35E3Q7Z769 313 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 OR1A1Q9P1Q5 309 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 DOCK11Q5JSL3 2073 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 LOC102723971A0A1B0GUV8 181 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 CD300LBA8K4G0 201 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 SOD3P08294 240 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 CTXN2P0C2S0 81 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 Q0VFX4 171 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 ZNF880Q6PDB4 577 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 TUSC5Q8IXB3 177 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 ABHD14BQ96IU4 210 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 ADGRG7Q96K78 797 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 OR2W1Q9Y3N9 320 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 DMRT1Q9Y5R6 373 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 HMGB3O15347 200 aaKnown RBP12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 CYB561P49447 251 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 SPANXN5Q5MJ07 72 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 VASH2Q86V25 355 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 PSENENQ9NZ42 101 aa12.94□□□□□ -0.34
SEMA3B-203ENST00000419007 DUXBA0A1W2PPF3 345 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 CYTIPO60759 359 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 LILRA1O75019 489 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 TRGC1P0CF51 173 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 PCSK4Q6UW60 755 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 C1orf87Q8N0U7 546 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 MRPL30Q8TCC3 161 aaKnown RBP12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FRZBQ92765 325 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 SIRT7Q9NRC8 400 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A10PA6NDY2 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A18PA6NE21 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 ZNF503-AS2A6NEH8 195 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A16PA6NEW6 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A20PA6NIJ5 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A8PA6NJQ4 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A7PA6NKC0 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A22PA8MWA6 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A12PA8MX19 464 aa12.93□□□□□ -0.34
SEMA3B-203ENST00000419007 FAM90A5PA8MXJ8 464 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms