RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ACSF3Q4G176 576 aaPredicted RBP8.37□□□□□ -1.07
CD44-206ENST00000415148 ZNF610Q8N9Z0 462 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 OR56B2PQ8NGI1 322 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 OR13D1Q8NGV5 346 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 FRZBQ92765 325 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 APOBEC3DQ96AK3 386 aaPredicted RBP8.37□□□□□ -1.07
CD44-206ENST00000415148 NIPSNAP3BQ9BS92 247 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 SMOC1Q9H4F8 434 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 CCL28Q9NRJ3 127 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 CRIM1Q9NZV1 1036 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 WSB1Q9Y6I7 421 aa8.37□□□□□ -1.07
CD44-206ENST00000415148 IGKV1D-13A0A0B4J2D9 117 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 SS18L1O75177 396 aaPredicted RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 IFNA5P01569 189 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 IGKV1-13P0DP09 117 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 GLIPR1P48060 266 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 ZNF880Q6PDB4 577 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 MRPL21Q7Z2W9 205 aaKnown RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 STX12Q86Y82 276 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 H1FOOQ8IZA3 346 aaPredicted RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 HIST3H2BBQ8N257 126 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 HIST1H2AAQ96QV6 131 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 TMEM242Q9NWH2 141 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 GAR1Q9NY12 217 aaKnown RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 MTCH1Q9NZJ7 389 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 TAAR3PQ9P1P4 343 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 RNF150Q9ULK6 438 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 NCKAP5O14513 1909 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 IGKV1-6A0A0C4DH72 117 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 H3BP45 60 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 TGOLN2O43493 480 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 GDF1P27539 372 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 GPM6AP51674 278 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 ARF1P84077 181 aaKnown RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 TLE1Q04724 770 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 Q0VFX4 171 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 PCSK4Q6UW60 755 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 PPP1R32Q7Z5V6 425 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 LSM10Q969L4 123 aaKnown RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 FGF23Q9GZV9 251 aaPredicted RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 VSIRQ9H7M9 311 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 IL36RNQ9UBH0 155 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 OR2W1Q9Y3N9 320 aa8.36□□□□□ -1.07
CD44-206ENST00000415148 DIDO1Q9BTC0 2240 aaKnown RBP8.36□□□□□ -1.07
CD44-206ENST00000415148 A0A0G2JRQ6 117 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 LOC102723971A0A1B0GUV8 181 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 B4E171 279 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 NPIPB11E5RHQ5 1161 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 TRGC1P0CF51 173 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 ARR3P36575 388 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 TSPAN7P41732 249 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 CYB561P49447 251 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 RPS18P62269 152 aaKnown RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 PNRC1Q12796 327 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 SSPNQ14714 243 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 ZNF324BQ6AW86 544 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 MRPL30Q8TCC3 161 aaKnown RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 ABHD3Q8WU67 409 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 MEGF10Q96KG7 1140 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 FSCN3Q9NQT6 498 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 BOKQ9UMX3 212 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 KIAA1324LA8MWY0 1029 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 HSPB6O14558 160 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 SERPINA7P05543 415 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 FABP4P15090 132 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 HLA-DRB3P79483 266 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 OR10J5Q8NHC4 309 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 NEK7Q8TDX7 302 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 MBD3L1Q8WWY6 194 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 GPR146Q96CH1 333 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 ZNF845Q96IR2 970 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 P2RX4Q99571 388 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 PSMG3Q9BT73 122 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 CABLES2Q9BTV7 478 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 PARD6GQ9BYG4 376 aaPredicted RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 DEPPQ9NTK1 212 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 CISD1Q9NZ45 108 aaKnown RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 MPC1Q9Y5U8 109 aa8.35□□□□□ -1.07
CD44-206ENST00000415148 TNRC6AQ8NDV7 1962 aaKnown RBP8.35□□□□□ -1.07
CD44-206ENST00000415148 FREM1Q5H8C1 2179 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PHOX2AO14813 284 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 CNOT4O95628 575 aaKnown RBP8.34□□□□□ -1.07
CD44-206ENST00000415148 F10P00742 488 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 SERPINE2P07093 398 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PGA5P0DJD9 388 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 S100A2P29034 98 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 CD200P41217 278 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 FGF8P55075 233 aaPredicted RBP8.34□□□□□ -1.07
CD44-206ENST00000415148 SERF2P84101 59 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PMS2P11Q13670 270 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PEAR1Q5VY43 1037 aaPredicted RBP8.34□□□□□ -1.07
CD44-206ENST00000415148 OR2T2Q6IF00 324 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 TCEAL6Q6IPX3 200 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 SLC23A3Q6PIS1 610 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 ZNF573Q86YE8 665 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 SCGB1C1Q8TD33 95 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 OR5P3Q8WZ94 311 aa8.34□□□□□ -1.07
CD44-206ENST00000415148 PSMF1Q92530 271 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms