RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 OR5AR1Q8NGP9 310 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 SPATA3Q8NHX4 192 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 C11orf45Q8TAV5 145 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF502Q8TBZ5 544 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 LINC00476Q8WZB0 136 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PCED1BQ96HM7 432 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 GMPPAQ96IJ6 420 aaPredicted RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 SEC22AQ96IW7 307 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PGLYRP3Q96LB9 341 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 LYSMD1Q96S90 227 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 TBX15Q96SF7 602 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 GPR21Q99679 349 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 RARRES2Q99969 163 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PRADC1Q9BSG0 188 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 RTBDNQ9BSG5 229 aaPredicted RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 CHST6Q9GZX3 395 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM222Q9H0R3 208 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 MED28Q9H204 178 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 ASIC5Q9NY37 505 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 CISD1Q9NZ45 108 aaKnown RBP3□□□□□ -1.93
SF3B1-203ENST00000414174 KLK11Q9UBX7 282 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 CYSLTR1Q9Y271 337 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
SF3B1-203ENST00000414174 AKAP11Q9UKA4 1901 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 MYH15Q9Y2K3 1946 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 DUOX2Q9NRD8 1548 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 FAM236DA0A1B0GTK5 79 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 A0A1B0GW64 132 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 A0A1W2PRS3 328 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 hADV38S2A0JD32 116 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 DDTLA6NHG4 134 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 UNC119BA6NIH7 251 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 G3V3Q6 166 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 H0YJW9 148 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM178BH3BS89 294 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 K7EMT4 169 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 CCL21O00585 134 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SPINT2O43291 252 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 BUB3O43684 328 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TRAF3IP2O43734 574 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TBL1XO60907 577 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 LYPD3O95274 346 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SHBGP04278 402 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 FGF1P05230 155 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 REG1AP05451 166 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 CTSDP07339 412 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 FAM236CP0DP71 79 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 PGAM2P15259 253 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 GABRG2P18507 467 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 RAB5AP20339 215 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 COX5AP20674 150 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SHC1P29353 583 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TSPOP30536 169 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 GPR183P32249 361 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 ELK3P41970 407 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 WDR5P61964 334 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SNRPD2P62316 118 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 GRB2P62993 217 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 LAMTOR4Q0VGL1 99 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 FOXI1Q12951 378 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 DHRS2Q13268 280 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 RBM39Q14498 530 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 UBE2V2Q15819 145 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 CCL15Q16663 113 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 KHDC3LQ587J8 217 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 DCAF12Q5T6F0 453 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 FHL5Q5TD97 284 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM244Q5VVB8 128 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 NXNL2Q5VZ03 156 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 OR2T5Q6IEZ7 315 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 PARM1Q6UWI2 310 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF788Q6ZQV5 615 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SLC22A18ASQ8N1D0 253 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SLC35G3Q8N808 338 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 OR11G2Q8NGC1 345 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 OR51T1Q8NGJ9 327 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 OR2T29Q8NH02 315 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 OLIG1Q8TAK6 271 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TFAP2CQ92754 450 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 STARD4Q96DR4 205 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SLAMF6Q96DU3 332 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 KAZALD1Q96I82 304 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 RDH12Q96NR8 316 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 ERMAPQ96PL5 475 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 OR4C12Q96R67 309 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 HSD17B10Q99714 261 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 GINS4Q9BRT9 223 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 DERL1Q9BUN8 251 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 APOOQ9BUR5 198 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 LRRC61Q9BV99 259 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SEC11CQ9BY50 192 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 ULBP3Q9BZM4 244 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 PBOV1Q9GZY1 135 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 RBKSQ9H477 322 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 MOB1AQ9H8S9 216 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 SERTAD4Q9NUC0 356 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM30AQ9NV96 361 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 TAS2R8Q9NYW2 309 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 NUFIP1Q9UHK0 495 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms