RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ODF4Q2M2E3 257 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 DCST2Q5T1A1 773 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ARRDC1Q8N5I2 433 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 COX18Q8N8Q8 333 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 ZSCAN4Q8NAM6 433 aaPredicted RBP8.07□□□□□ -1.12
SNHG3-201ENST00000413987 OR10W1Q8NGF6 305 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 OR2V2Q96R30 315 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 STACQ99469 402 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 NUDT9Q9BW91 350 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 CST11Q9H112 138 aa8.07□□□□□ -1.12
SNHG3-201ENST00000413987 SEC14L6B5MCN3 397 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 PPP1R2P9O14990 202 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 UMODP07911 640 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 LPAR6P43657 344 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 ZP4Q12836 540 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 BIKQ13323 160 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 KIAA0141Q14154 515 aaPredicted RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 PSG5Q15238 335 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TBR1Q16650 682 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 NCMAPQ5T1S8 102 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 STUMQ69YW2 141 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 CPEB2Q7Z5Q1 589 aaKnown RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 ANKRD37Q7Z713 158 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 C9orf40Q8IXQ3 194 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF615Q8N8J6 731 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 LYPD6BQ8NI32 183 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 R3HDM4Q96D70 268 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 NMNAT3Q96T66 252 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 C2orf88Q9BSF0 95 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TAF9BQ9HBM6 251 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 FLRT3Q9NZU0 649 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 GNG12Q9UBI6 72 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 MRPS28Q9Y2Q9 187 aaKnown RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 IGLV3-12A0A075B6K2 115 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 A0A1B0GWA3 101 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 HSBP1O75506 76 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 KLF7O75840 302 aaPredicted RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TNFSF15O95150 251 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 CT45A8P0DMV1 189 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 CT45A9P0DMV2 189 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TBPP20226 339 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 IDH3GP51553 393 aaPredicted RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 OR2B8PP59922 312 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 RANP62826 216 aaKnown RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 CT45A2Q5DJT8 189 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 LINC01590Q5TEZ4 76 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 PNLDC1Q8NA58 520 aaKnown RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 RNASEH2CQ8TDP1 164 aaKnown RBP8.06□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF721Q8TF20 911 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 CASTOR1Q8WTX7 329 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 PTX4Q96A99 478 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 ISOC2Q96AB3 205 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 DCBLD2Q96PD2 775 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 NDUFAF3Q9BU61 184 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 SAP30LQ9HAJ7 183 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 POLDIP2Q9Y2S7 368 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TMED7Q9Y3B3 224 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TMED3Q9Y3Q3 217 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 TMEM14AQ9Y6G1 99 aa8.06□□□□□ -1.12
SNHG3-201ENST00000413987 IGKV3-11P04433 115 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 DDTP30046 118 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 AKR1C3P42330 323 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 TGIF1Q15583 401 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 POU2AF1Q16633 256 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 ELOA3BQ3SY89 546 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 ALG10BQ5I7T1 473 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 LINC00114Q6XXX2 140 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 SLC16A14Q7RTX9 510 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 TMEM144Q7Z5S9 345 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 CDC20BQ86Y33 519 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 FAM24BQ8N5W8 94 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 ELOA3Q8NG57 546 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 OR5AU1Q8NGC0 362 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 SECTM1Q8WVN6 248 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 ZNRF4Q8WWF5 429 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 LIN37Q96GY3 246 aaPredicted RBP8.05□□□□□ -1.12
SNHG3-201ENST00000413987 NXF5Q9H1B4 397 aaKnown RBP8.05□□□□□ -1.12
SNHG3-201ENST00000413987 CKLFQ9UBR5 152 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 FLVCR1Q9Y5Y0 555 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PCSK5Q92824 1860 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.05□□□□□ -1.12
SNHG3-201ENST00000413987 MEGF11A6BM72 1044 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PRR32B1ATL7 298 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 C9JQL5 133 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 CHST1O43916 411 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 ZNF354AO60765 605 aaPredicted RBP8.05□□□□□ -1.12
SNHG3-201ENST00000413987 TSPAN15O95858 294 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 GP9P14770 177 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 TCN2P20062 427 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 SULT1A1P50225 295 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PRR20EP86478 221 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PRR20CP86479 221 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PRR20DP86480 221 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PRR20BP86481 221 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 PRR20AP86496 221 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 TMEM200BQ69YZ2 307 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 NUFIP2Q7Z417 695 aaKnown RBP8.05□□□□□ -1.12
SNHG3-201ENST00000413987 CD163Q86VB7 1156 aa8.05□□□□□ -1.12
SNHG3-201ENST00000413987 LRRC18Q8N456 261 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms