RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 C20orf173Q96LM9 149 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GPR27Q9NS67 375 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KLF13Q9Y2Y9 288 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GON4LQ3T8J9 2241 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 HEG1Q9ULI3 1381 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DL5BA0A0G2JN68 375 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DL5BA0A0G2JPC4 375 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GPR75O95800 540 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 CLDN2P57739 230 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FCRLBQ6BAA4 426 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KLHDC8AQ8IYD2 350 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DL5AQ8N109 375 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KREMEN2Q8NCW0 462 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 PFN4Q8NHR9 129 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 NKD2Q969F2 451 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 RNF166Q96A37 237 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ABHD14AQ9BUJ0 271 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GSN-AS1Q9NRJ2 163 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KLRD1Q13241 179 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM255AQ5JRV8 349 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF385CQ66K41 422 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 APOBEC3HQ6NTF7 200 aaKnown RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SLC48A1Q6P1K1 146 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ADAD2Q8NCV1 583 aaKnown RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FAM222BQ8WU58 562 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 CT55Q8WUE5 264 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 WDR54Q9H977 334 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SLC25A19Q9HC21 320 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 HINT3Q9NQE9 182 aaKnown RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 DMRT1Q9Y5R6 373 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 A0A1W2PQU0 124 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM150BA6NC51 233 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 LINC01387J3KSC0 135 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 WNT7AO00755 349 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 TNFSF14O43557 240 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 HYPMO75409 117 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SPINK8P0C7L1 97 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 APOBEC1P41238 236 aaKnown RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FAM71AQ8IYT1 594 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 PLPPR1Q8TBJ4 325 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ROBO4Q8WZ75 1007 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GLIPR2Q9H4G4 154 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 MED20Q9H944 212 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 TRBV20OR9-2A0A075B6H5 130 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DS5A0A0G2JLQ3 304 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 A0A0G2JNG1 304 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A7PA6NKC0 464 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A22PA8MWA6 464 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A12PA8MX19 464 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 FAM90A23PA8MXZ1 464 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 KIR2DS3K7RE56 304 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 AMBPP02760 352 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GLULP15104 373 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 C15orf39Q6ZRI6 1047 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 C8orf46Q8TAG6 207 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ARPC1AQ92747 370 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 DLX4Q92988 240 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 PRDM15P57071 1507 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GCM2O75603 506 aaPredicted RBP4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SBK3P0C264 359 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM10L2AP0DMW4 78 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 SMIM10L2BP0DMW5 78 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 ZNF585BQ52M93 769 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 Q6AWC8 147 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 MUSTN1Q8IVN3 82 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 TMEM190Q8WZ59 177 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 RMI2Q96E14 147 aa4.04□□□□□ -1.76
PTPN13-202ENST00000411767 GPR25O00155 361 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CTAG2O75638 210 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 IGHG2P01859 326 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CD5P06127 495 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 EGR3Q06889 387 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 WIPI1Q5MNZ9 446 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 IBA57Q5T440 356 aaKnown RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 GPBAR1Q8TDU6 330 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SIGLEC11Q96RL6 698 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CXCL16Q9H2A7 254 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 NEUROG3Q9Y4Z2 214 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CPS1P31327 1500 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 LINC00614P0C842 121 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 PSG1P11464 419 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MMP9P14780 707 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 KLK2P20151 261 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 GLRXP35754 106 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SYNJ2BPP57105 145 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 PRR4Q16378 134 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 CDKN3Q16667 212 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MESTQ5EB52 335 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 LDLRAD3Q86YD5 345 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 OR5C1Q8NGR4 320 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 MARVELD1Q9BSK0 173 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SDF2L1Q9HCN8 221 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 ROBO2Q9HCK4 1378 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 FAM240AA0A1B0GVK7 77 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SNAI1O95863 264 aaPredicted RBP4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SELENOPP49908 381 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 LYG1Q8N1E2 194 aa4.03□□□□□ -1.76
PTPN13-202ENST00000411767 SCAMP5Q8TAC9 235 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms