RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 RSPO1Q2MKA7 263 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-205ENST00000409455 DCAF12Q5T6F0 453 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM211Q6ICI0 200 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 C16orf82Q7Z2V1 217 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
LIMS2-205ENST00000409455 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 PYGO2Q9BRQ0 406 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 SLC7A10Q9NS82 523 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 M0R143 59 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 PFN1P07737 140 aaKnown RBP13.26□□□□□ -0.29
LIMS2-205ENST00000409455 PDLIM4P50479 330 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
LIMS2-205ENST00000409455 PMS2P11Q13670 270 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 MRGPRGQ86SM5 289 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 OR2AE1Q8NHA4 323 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 RSG1Q9BU20 258 aa13.26□□□□□ -0.29
LIMS2-205ENST00000409455 H3BP45 60 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 ZFAND5O76080 213 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 SFTPCP11686 197 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 METTL7AQ9H8H3 244 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 Q9N2K0 584 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 RNF115Q9Y4L5 304 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 KNTC1P50748 2209 aa13.25□□□□□ -0.29
LIMS2-205ENST00000409455 CCKARP32238 428 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 GALR1P47211 349 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 NPBWR2P48146 333 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 ERVS71-1P61550 626 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 RAB35Q15286 201 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 CYB5R2Q6BCY4 276 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 ASCL4Q6XD76 172 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 ZNF818PQ6ZRF7 136 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 GAPTQ8N292 157 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 PLPPR1Q8TBJ4 325 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM170AQ8WVE7 144 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM9BQ9NQ34 198 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 EXPH5Q8NEV8 1989 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 LOC102723996A0A087X1L8 192 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 IGKV1-12A0A0C4DH73 117 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 H7BYZ3 331 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 IGKV1D-12P01611 117 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 CYC1P08574 325 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 UCP1P25874 307 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 PAX9P55771 341 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM267Q0VDI3 215 aaPredicted RBP13.24□□□□□ -0.29
LIMS2-205ENST00000409455 PCOLCEQ15113 449 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 C10orf128Q5T292 105 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 Q6ZPA2 131 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 CYP2G1PQ6ZSU1 146 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 OR51G1Q8NGK1 321 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 STRADBQ9C0K7 418 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 RBKSQ9H477 322 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 PRSS50Q9UI38 385 aa13.24□□□□□ -0.29
LIMS2-205ENST00000409455 LOC102725191A0A1B0GVB3 256 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 OR4A8P0C604 315 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 METTL15P1P0C7V9 234 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 ERVFC1-1P60608 527 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 PDCD1Q15116 288 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 ZNF726P1Q15940 193 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM241Q24JQ0 296 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 FAM180AQ6UWF9 173 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 OR2Y1Q8NGV0 311 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 NABP1Q96AH0 204 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 R3HDM4Q96D70 268 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 AGMATQ9BSE5 352 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 RBM24Q9BX46 236 aaKnown RBP13.23□□□□□ -0.29
LIMS2-205ENST00000409455 CBLN4Q9NTU7 201 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 COL27A1Q8IZC6 1860 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-205ENST00000409455 IGHV1-45A0A0A0MS14 117 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 TNFSF12O43508 249 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 OR7C1O76099 320 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-205ENST00000409455 CELA2AP08217 269 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 MMP7P09237 267 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-205ENST00000409455 NUBP1P53384 320 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 RPS18P62269 152 aaKnown RBP13.23□□□□□ -0.29
LIMS2-205ENST00000409455 HIST1H3AP68431 136 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 ACOT6Q3I5F7 207 aaPredicted RBP13.23□□□□□ -0.29
LIMS2-205ENST00000409455 GPHA2Q96T91 129 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 DEFB126Q9BYW3 111 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 IL36GQ9NZH8 169 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 TAAR3PQ9P1P4 343 aa13.23□□□□□ -0.29
LIMS2-205ENST00000409455 NRASP01111 189 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 MBP02144 154 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 ZNF25P17030 456 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-205ENST00000409455 RBM11P57052 281 aaKnown RBP13.22□□□□□ -0.29
LIMS2-205ENST00000409455 TIPARPQ7Z3E1 657 aaKnown RBP13.22□□□□□ -0.29
LIMS2-205ENST00000409455 PSMG3Q9BT73 122 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-205ENST00000409455 FREM2Q5SZK8 3169 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 A0A1W2PPQ1 181 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 MAP1LC3B2A6NCE7 125 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 ACSF3Q4G176 576 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-205ENST00000409455 PHYHD1Q5SRE7 291 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 KMT2EQ8IZD2 1858 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 OR5D13Q8NGL4 314 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms