RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 KALRNO60229 2985 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 IFITM10A6NMD0 228 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 NPIPB11E5RHQ5 1161 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 CHST1O43916 411 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 OR13C7P0DN81 318 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 ERVK11-1P61568 191 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 RAB1AP62820 205 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 OR1C1Q15619 314 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 ZNF585BQ52M93 769 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 RNFT1Q5M7Z0 435 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 IL22RA2Q969J5 263 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 GPR146Q96CH1 333 aa8.35□□□□□ -1.07
MSH2-202ENST00000406134 BOKQ9UMX3 212 aaPredicted RBP8.35□□□□□ -1.07
MSH2-202ENST00000406134 SLC33A1O00400 549 aaPredicted RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 TXNL1O43396 289 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 MT-ND4LP03901 98 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 CELA3BP08861 270 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 PSG2P11465 335 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 VDAC1P21796 283 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 SRPXP78539 464 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 IL24Q13007 206 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 EIF4EBP1Q13541 118 aaPredicted RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 AKIRIN2Q53H80 203 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 FAM53AQ6NSI3 398 aaPredicted RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 MUCL1Q96DR8 90 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 EIF5A2Q9GZV4 153 aaKnown RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 VSIRQ9H7M9 311 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 COLQQ9Y215 455 aaPredicted RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 DIDO1Q9BTC0 2240 aaKnown RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 TRAV39A0A0B4J263 110 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 IFNA4P05014 189 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 RAB5AP20339 215 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 F2RP25116 425 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 HEPN1Q6WQI6 88 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 OR2G3Q8NGZ4 309 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 CLDND2Q8NHS1 167 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 SPRR3Q9UBC9 169 aa8.34□□□□□ -1.07
MSH2-202ENST00000406134 TET2Q6N021 2002 aaPredicted RBP8.34□□□□□ -1.07
MSH2-202ENST00000406134 WISP2O76076 250 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 MT-CO3P00414 261 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 RD3LP0DJH9 198 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 HLA-DRB3P79483 266 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 RHEBQ15382 184 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 ZNF695Q8IW36 515 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 FAM24BQ8N5W8 94 aa8.34□□□□□ -1.08
MSH2-202ENST00000406134 RBFOX3A6NFN3 312 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 HS3ST1O14792 307 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 LAMTOR5O43504 91 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 TK1P04183 234 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 MMP9P14780 707 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 DCAF10Q5QP82 559 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 SLC16A13Q7RTY0 426 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 MRPL21Q7Z2W9 205 aaKnown RBP8.33□□□□□ -1.08
MSH2-202ENST00000406134 LINC00596Q86U02 117 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 OR1K1Q8NGR3 316 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 BCL2L2Q92843 193 aaPredicted RBP8.33□□□□□ -1.08
MSH2-202ENST00000406134 FAM86C1Q9NVL1 165 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 IL17BQ9UHF5 180 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 UBE2J1Q9Y385 318 aaPredicted RBP8.33□□□□□ -1.08
MSH2-202ENST00000406134 OR2W1Q9Y3N9 320 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 LNP1A1A4G5 178 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 ZNF14P17017 642 aaPredicted RBP8.33□□□□□ -1.08
MSH2-202ENST00000406134 BRWD1-AS2P59051 145 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 ERVS71-1P61550 626 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 GNMTQ14749 295 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 ZNF497Q6ZNH5 498 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 BEND4Q6ZU67 534 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 NIT2Q9NQR4 276 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 BDP1A6H8Y1 2624 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 H0YL77 283 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 CXCL1P09341 107 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 CBR1P16152 277 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 ALKBH6Q3KRA9 238 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 SPIN3Q5JUX0 258 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 TMEM217Q8N7C4 229 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 RDH5Q92781 318 aa8.33□□□□□ -1.08
MSH2-202ENST00000406134 ZNF727A8MUV8 499 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 TRAPPC2LH3BP13 241 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 SCAF4O95104 1147 aaKnown RBP8.32□□□□□ -1.08
MSH2-202ENST00000406134 P0C879 139 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ZNF883P0CG24 379 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 SLC25A6P12236 298 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 BAXQ07812 192 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ZNF266Q14584 549 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ZNF766Q5HY98 468 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ZNF506Q5JVG8 444 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 SPATA46Q5T0L3 261 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 MDP1Q86V88 176 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 MKXQ8IYA7 352 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 IL22RA1Q8N6P7 574 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 ATP5SQ99766 215 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 OR51B6Q9H340 312 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 GSN-AS1Q9NRJ2 163 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 KIAA1456Q9P272 454 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 METTL1Q9UBP6 276 aaKnown RBP8.32□□□□□ -1.08
MSH2-202ENST00000406134 DSCAML1Q8TD84 2053 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 EP300Q09472 2414 aaPredicted RBP8.32□□□□□ -1.08
MSH2-202ENST00000406134 PHOX2AO14813 284 aa8.32□□□□□ -1.08
MSH2-202ENST00000406134 CD59P13987 128 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms