RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 Q8N7P7 452 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 OR13A1Q8NGR1 328 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 MCFD2Q8NI22 146 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 C15orf40Q8WUR7 153 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 DYRK2Q92630 601 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 LHX4Q969G2 390 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 ARL11Q969Q4 196 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 JMJD8Q96S16 334 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 TBX15Q96SF7 602 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 DCUN1D5Q9BTE7 237 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 C6orf62Q9GZU0 229 aaPredicted RBP8.63□□□□□ -1.03
RPAIN-204ENST00000405578 ZMAT3Q9HA38 289 aaKnown RBP8.63□□□□□ -1.03
RPAIN-204ENST00000405578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.63□□□□□ -1.03
RPAIN-204ENST00000405578 NUP50Q9UKX7 468 aa8.63□□□□□ -1.03
RPAIN-204ENST00000405578 TRBV6-6A0A0A6YYG2 114 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 TRAV40A0A0B4J280 105 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 TOR1AO14656 332 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 NAPSAO96009 420 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 DTYMKP23919 212 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 S100A5P33763 92 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 KIR2DS4P43632 304 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 UBE2E1P51965 193 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 DLX6P56179 175 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 LGALS4P56470 323 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 KIR2DS1Q14954 304 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 PRAMEF5Q5TYX0 476 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 ZNF782Q6ZMW2 699 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-204ENST00000405578 TCF23Q7RTU1 214 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 RTN4RL2Q86UN3 420 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 PRR18Q8N4B5 295 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 RFESDQ8TAC1 157 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 MRPL30Q8TCC3 161 aaKnown RBP8.62□□□□□ -1.03
RPAIN-204ENST00000405578 MS4A7Q9GZW8 240 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-204ENST00000405578 TMEM133Q9H2Q1 129 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 LINC00574Q9H8X3 128 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 TAF9BQ9HBM6 251 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
RPAIN-204ENST00000405578 IDI2-AS1Q9NZ38 188 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 RABL2AQ9UBK7 228 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-204ENST00000405578 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 MRPS7Q9Y2R9 242 aaKnown RBP8.62□□□□□ -1.03
RPAIN-204ENST00000405578 A3GALT2U3KPV4 340 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 WNK1Q9H4A3 2382 aa8.62□□□□□ -1.03
RPAIN-204ENST00000405578 CMYA5Q8N3K9 4069 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 TRAV39A0A0B4J263 110 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 IGHV1-69DA0A0B4J2H0 117 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 CENPVL3A0A0U1RRI6 287 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 TMEM235A6NFC5 223 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 C12orf77C9JDV5 145 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 NPIPB11E5RHQ5 1161 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-204ENST00000405578 RGS11O94810 467 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 TPPPO94811 219 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 AVPP01185 164 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 IGHV1-69P01742 117 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 HBZP02008 142 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 EIF4EP06730 217 aaKnown RBP8.61□□□□□ -1.03
RPAIN-204ENST00000405578 CGB3P0DN86 165 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 CGB7P0DN87 165 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 RCC1P18754 421 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-204ENST00000405578 ELK1P19419 428 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 OMGP23515 440 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 COX7A1P24310 79 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 NFYBP25208 207 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 SSTR5P35346 364 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 CBX5P45973 191 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 PRRX1P54821 245 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 FOXL1Q12952 345 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 C17orf58Q2M2W7 97 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 ZNF260Q3ZCT1 412 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 STEAP3Q658P3 488 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 BAIAP2L2Q6UXY1 529 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 RBMS3Q6XE24 437 aaKnown RBP8.61□□□□□ -1.03
RPAIN-204ENST00000405578 C1orf229Q6ZS94 237 aaPredicted RBP8.61□□□□□ -1.03
RPAIN-204ENST00000405578 OR52M1Q8NGK5 317 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 CREB3L1Q96BA8 519 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 GALMQ96C23 342 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 SUCNR1Q9BXA5 334 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 CLEC7AQ9BXN2 247 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 SLIRPQ9GZT3 109 aaKnown RBP8.61□□□□□ -1.03
RPAIN-204ENST00000405578 MMP27Q9H306 513 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 AUNIPQ9H7T9 357 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 ZNF286AQ9HBT8 521 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 ESM1Q9NQ30 184 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 GNG12Q9UBI6 72 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 KCNK7Q9Y2U2 307 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 FAM96BQ9Y3D0 163 aa8.61□□□□□ -1.03
RPAIN-204ENST00000405578 IGHV3OR16-10A0A075B7F0 116 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 TRDCB7Z8K6 153 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 F2RL2O00254 374 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 HSPA12AO43301 675 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 MELTFP08582 738 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 FCGR3AP08637 254 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 IGHV4-38-2P0DP08 117 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 PRSS3P35030 304 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 TAS2R20P59543 309 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 HLA-DRB3P79483 266 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 HTD2P86397 168 aa8.6□□□□□ -1.03
RPAIN-204ENST00000405578 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
RPAIN-204ENST00000405578 LTC4SQ16873 150 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms