RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 OR6C6A6NF89 314 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 PCP4P48539 62 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 DYNLT3P51808 116 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 TNFRSF9Q07011 255 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 RTP5Q14D33 572 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 GPR157Q5UAW9 335 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 CMTM1Q8IZ96 169 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 SLC35G3Q8N808 338 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 UBALD1Q8TB05 177 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 IL1F10Q8WWZ1 152 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 SF3B5Q9BWJ5 86 aaKnown RBP12.91□□□□□ -0.34
ATG4B-206ENST00000405546 SNHG12Q9BXW3 62 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 SCGB1D1O95968 90 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 BMP5P22003 454 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 AADACP22760 399 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 OTX1P32242 354 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-206ENST00000405546 FUT6P51993 359 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 COL10A1Q03692 680 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 ZFP36L1Q07352 338 aaKnown RBP12.91□□□□□ -0.34
ATG4B-206ENST00000405546 PMS2P11Q13670 270 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF100Q8IYN0 542 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 UBALD2Q8IYN6 164 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 COMMD1Q8N668 190 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 CPEB3Q8NE35 698 aaKnown RBP12.91□□□□□ -0.34
ATG4B-206ENST00000405546 ARRDC1-AS1Q9H2J1 176 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF816-ZNF321PA0A0X1KG74 233 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 XKRY2A2RUG3 117 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 SYNGR4O95473 234 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 GLIPR1P48060 266 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 IDH3GP51553 393 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-206ENST00000405546 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
ATG4B-206ENST00000405546 GGNQ86UU5 652 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 RDH5Q92781 318 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 C2orf88Q9BSF0 95 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
ATG4B-206ENST00000405546 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-206ENST00000405546 CRYM-AS1A6NIL9 109 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 FGF7P21781 194 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 CRYGSP22914 178 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 WNT5AP41221 380 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 IGFBP7Q16270 282 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 SPATA46Q5T0L3 261 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 BTNL3Q6UXE8 466 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF695Q8IW36 515 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 LGI3Q8N145 548 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 OR4X1Q8NH49 305 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 IL36RNQ9UBH0 155 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 BOKQ9UMX3 212 aaPredicted RBP12.9□□□□□ -0.34
ATG4B-206ENST00000405546 NBEAQ8NFP9 2946 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 NPSP0C0P6 89 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 CLN3Q13286 438 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 TRA2AQ13595 282 aaKnown RBP eCLIP12.9□□□□□ -0.34
ATG4B-206ENST00000405546 ALKBH2Q6NS38 261 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF66Q6ZN08 573 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 OR2C3Q8N628 320 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
ATG4B-206ENST00000405546 STRAPQ9Y3F4 350 aaKnown RBP12.9□□□□□ -0.34
ATG4B-206ENST00000405546 A0A1W2PPQ1 181 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 NTN3O00634 580 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-206ENST00000405546 MSTNO14793 375 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 PDCD6O75340 191 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 MAGEA5P43359 124 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 VAMP2P63027 116 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 C1orf210Q8IVY1 113 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 EXTL1Q92935 676 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 TP53RKQ96S44 253 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 GLRX2Q9NS18 164 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 EXPH5Q8NEV8 1989 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 IL18BPO95998 194 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 BCL3P20749 454 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 SIGLEC12Q96PQ1 595 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 ELOVL1Q9BW60 279 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 STRADBQ9C0K7 418 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 VSIRQ9H7M9 311 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 DOCK10Q96BY6 2186 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 TRAV39A0A0B4J263 110 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 CEBPZOSA8MTT3 80 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 ZNF732B4DXR9 585 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 NGFP01138 241 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 ZNF16P17020 682 aaPredicted RBP12.89□□□□□ -0.35
ATG4B-206ENST00000405546 TMEM187Q14656 261 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 TESK1Q15569 626 aa12.89□□□□□ -0.35
ATG4B-206ENST00000405546 LRRC3CA6NJW4 275 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 TK1P04183 234 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 PLP2Q04941 152 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 TMEM267Q0VDI3 215 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-206ENST00000405546 SLC10A1Q14973 349 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 FAM185AQ8N0U4 392 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 RPUSD4Q96CM3 377 aaKnown RBP12.88□□□□□ -0.35
ATG4B-206ENST00000405546 NDUFAF3Q9BU61 184 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 PRR14LQ5THK1 2151 aa12.88□□□□□ -0.35
ATG4B-206ENST00000405546 TRAPPC2LH3BP13 241 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms