RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ATRQ13535 2644 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 DIRAS3O95661 229 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 IGLV1-47P01700 117 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 CD3GP09693 182 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 RCC1P18754 421 aaPredicted RBP14.37□□□□□ -0.11
CTNS-203ENST00000399306 PRRX1P54821 245 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 DLX1P56177 255 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 MRPS15P82914 257 aaKnown RBP14.37□□□□□ -0.11
CTNS-203ENST00000399306 HMGN3Q15651 99 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 PNLIPRP3Q17RR3 467 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 DEFB112Q30KQ8 113 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 UBE2NLQ5JXB2 153 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 Q6YL49 198 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 OR9G1Q8NH87 305 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 CCDC107Q8WV48 283 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 MALSU1Q96EH3 234 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 TAF9BQ9HBM6 251 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 DIABLOQ9NR28 239 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 FAM96BQ9Y3D0 163 aa14.37□□□□□ -0.11
CTNS-203ENST00000399306 A0A0U1RQK1 487 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 MEIOCA2RUB1 952 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 HBZP02008 142 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 OMGP23515 440 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 DTYMKP23919 212 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 COX7A1P24310 79 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 SOX6P35712 828 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 GDNFP39905 211 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 LOXL3P58215 753 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 ZNF260Q3ZCT1 412 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 STEAP3Q658P3 488 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 MZT2AQ6P582 158 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 Q6ZS49 121 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 PDZD9Q8IXQ8 264 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 LINC00311Q8N616 119 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 SIGLECL1Q8N7X8 197 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 NDNFQ8TB73 568 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 C22orf15Q8WYQ4 148 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 ISOC1Q96CN7 298 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 S100A16Q96FQ6 103 aaKnown RBP14.36□□□□□ -0.11
CTNS-203ENST00000399306 ZNF48Q96MX3 618 aaPredicted RBP14.36□□□□□ -0.11
CTNS-203ENST00000399306 CHMP1AQ9HD42 196 aaPredicted RBP14.36□□□□□ -0.11
CTNS-203ENST00000399306 Q9N2K0 584 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 GFOD1Q9NXC2 390 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 JPT1Q9UK76 154 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 POMT1Q9Y6A1 747 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 CEPT1Q9Y6K0 416 aa14.36□□□□□ -0.11
CTNS-203ENST00000399306 TRAV39A0A0B4J263 110 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 APOA1P02647 267 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 ARG1P05089 322 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 MELTFP08582 738 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 GNB3P16520 340 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 HTR1DP28221 377 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 HLA-DRB5Q30154 266 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 CDNFQ49AH0 187 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 HACD4Q5VWC8 232 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 RFESDQ8TAC1 157 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 SSMEM1Q8WWF3 244 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 ZDHHC16Q969W1 377 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 GALMQ96C23 342 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 AJUBAQ96IF1 538 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 ZNF286AQ9HBT8 521 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 CCDC59Q9P031 241 aaKnown RBP14.35□□□□□ -0.11
CTNS-203ENST00000399306 ZNRD1Q9P1U0 126 aa14.35□□□□□ -0.11
CTNS-203ENST00000399306 AMMECR1Q9Y4X0 333 aaPredicted RBP14.35□□□□□ -0.11
CTNS-203ENST00000399306 VGLL3A8MV65 326 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 OOSP1A8MZH6 123 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 H3BMQ9 156 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 J3QR06 171 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 TOR1AO14656 332 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 XRCC3O43542 346 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 RGS11O94810 467 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 TPPPO94811 219 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 NFYBP25208 207 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 CEACAM3P40198 252 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 KIR2DS4P43632 304 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 KIR2DS1Q14954 304 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 SPCS2Q15005 226 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 SAMD12Q8N8I0 201 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 OR4P4Q8NGL7 312 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 DYNC2LI1Q8TCX1 351 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 RBM38Q9H0Z9 239 aaKnown RBP14.34□□□□□ -0.11
CTNS-203ENST00000399306 MMP28Q9H239 520 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 DPAGT1Q9H3H5 408 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 NDUFA13Q9P0J0 144 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 DPM3Q9P2X0 92 aa14.34□□□□□ -0.11
CTNS-203ENST00000399306 SDCBPO00560 298 aaPredicted RBP14.33□□□□□ -0.12
CTNS-203ENST00000399306 YPEL1O60688 119 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 FCGR3AP08637 254 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 TALDO1P37837 337 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 DYNLT3P51808 116 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 HLA-DRB3P79483 266 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 PRB3Q04118 309 aaPredicted RBP14.33□□□□□ -0.12
CTNS-203ENST00000399306 ARFRP1Q13795 201 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 OLFML2AQ68BL7 652 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 Q6ZPA2 131 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 ZDHHC22Q8N966 263 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 OR5R1Q8NH85 324 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 YPEL2Q96QA6 119 aa14.33□□□□□ -0.12
CTNS-203ENST00000399306 HDHD3Q9BSH5 251 aaPredicted RBP14.33□□□□□ -0.12
CTNS-203ENST00000399306 PSG11Q9UQ72 335 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms