RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 YPEL5P62699 121 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 SEC11AP67812 179 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 COL10A1Q03692 680 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 Q6ZSR6 202 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 TRBV9A0A0B4J1U6 114 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 TRAV5A0A0B4J249 113 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 CTXND1A0A1B0GTU2 59 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 ITGBL1O95965 494 aaPredicted RBP8.45□□□□□ -1.06
SMAD9-203ENST00000399275 RPS16P62249 146 aaKnown RBP8.45□□□□□ -1.06
SMAD9-203ENST00000399275 OTPQ5XKR4 325 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 MARCH3Q86UD3 253 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 GJC3Q8NFK1 279 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 ULBP2Q9BZM5 246 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 THYN1Q9P016 225 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 MMP17Q9ULZ9 603 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 UFC1Q9Y3C8 167 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 DOCK1Q14185 1865 aa8.45□□□□□ -1.06
SMAD9-203ENST00000399275 TRAV8-1A0A0A6YYK1 113 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM50AO95807 157 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SELEP16581 610 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 APOBEC1P41238 236 aaKnown RBP8.44□□□□□ -1.06
SMAD9-203ENST00000399275 MICBQ29980 383 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SPACA5Q96QH8 159 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TAAR6Q96RI8 345 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 B3GAT1Q9P2W7 334 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 NINQ8N4C6 2090 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 KBTBD11O94819 623 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 EWSR1Q01844 656 aaKnown RBP eCLIP8.44□□□□□ -1.06
SMAD9-203ENST00000399275 DGAT2L7PQ6IED9 249 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF793Q6ZN11 406 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM144Q7Z5S9 345 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 DOLPP1Q86YN1 238 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TSPAN32Q96QS1 320 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 HS3ST1O14792 307 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TNFSF13O75888 250 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 DRD1P21728 446 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SHBQ15464 509 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 COMMD5Q9GZQ3 224 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SH2D2AQ9NP31 389 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 MED29Q9NX70 200 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
SMAD9-203ENST00000399275 CDC14BO60729 498 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 OR2A4O95047 310 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 NKX2-2O95096 273 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 NPSP0C0P6 89 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 VSIG10L2P0DP72 767 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 FOXL2P58012 376 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 STARD6P59095 220 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 OR2A7Q96R45 310 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 P2RX4Q99571 388 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 GDE1Q9NZC3 331 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SCN9AQ15858 1988 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 CDC14CA4D256 554 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TGFAP01135 160 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 AMY1AP04745 511 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
SMAD9-203ENST00000399275 FUT3P21217 361 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 PPP1CCP36873 323 aaKnown RBP8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TSPAN7P41732 249 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 FMODQ06828 376 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 POU2AF1Q16633 256 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF542PQ5EBM4 170 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 C1orf194Q5T5A4 169 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SAMD5Q5TGI4 173 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 TMEM106BQ9NUM4 274 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 LRP12Q9Y561 859 aa8.44□□□□□ -1.06
SMAD9-203ENST00000399275 SCN1AP35498 2009 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 GGTLC2Q14390 218 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 KIAA1644Q3SXP7 199 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 PNKDQ8N490 385 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 LSM10Q969L4 123 aaKnown RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 LHX9Q9NQ69 397 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 THAP10Q9P2Z0 257 aaPredicted RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 C3orf85A0A1B0GTC6 90 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 UCP1P25874 307 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 LPAR6P43657 344 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 PPICP45877 212 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 DCDP81605 110 aaKnown RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 COL9A2Q14055 689 aaPredicted RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 FER1L6-AS2Q96M78 137 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 TPSD1Q9BZJ3 242 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 DNAJB12Q9NXW2 375 aaKnown RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 SIRT4Q9Y6E7 314 aaPredicted RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 CNTRLQ7Z7A1 2325 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 FKBP2P26885 142 aaKnown RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H1AQ02539 215 aaPredicted RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 PMVKQ15126 192 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 MOGAT3Q86VF5 341 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 ZG16BQ96DA0 208 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 ST20Q9HBF5 79 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 WNT16Q9UBV4 365 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 CD160O95971 181 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 RPS27P42677 84 aaKnown RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 CLDN17P56750 224 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF324BQ6AW86 544 aaPredicted RBP8.43□□□□□ -1.06
SMAD9-203ENST00000399275 ZNF562Q6V9R5 426 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 BIVMQ86UB2 503 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 KCNS1Q96KK3 526 aa8.43□□□□□ -1.06
SMAD9-203ENST00000399275 HIST1H2BLQ99880 126 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms