RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 FOXF2Q12947 444 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 MST1LQ2TV78 715 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TRAT1Q6PIZ9 186 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TCTEX1D1Q8N7M0 179 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PRSS33Q8NF86 280 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 OR10Z1Q8NGY1 313 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PLPPR1Q8TBJ4 325 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 LYRM2Q9NU23 88 aaPredicted RBP14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 LIN7CQ9NUP9 197 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TINAGQ9UJW2 476 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 CARHSP1Q9Y2V2 147 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 OOEPA6NGQ2 149 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TRIM77I1YAP6 450 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 MLNRO43193 412 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 HSPA12AO43301 675 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 MED6O75586 246 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SMIM21Q3B7S5 101 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ALKBH6Q3KRA9 238 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 BTNL8Q6UX41 500 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 C11orf53Q8IXP5 236 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 NARS2Q96I59 477 aaKnown RBP14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 LUZP4Q9P127 313 aa14.97□□□□□ -0.01
HLA-DQB1-204ENST00000399084 IGHV1-18A0A0C4DH31 117 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ADAM20O43506 726 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PITX3O75364 302 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 PTBP3O95758 552 aaKnown RBP14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 DANCRP0C864 163 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 EWSR1Q01844 656 aaKnown RBP eCLIP14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 TESK1Q15569 626 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ACP7Q6ZNF0 438 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 ERGIC1Q969X5 290 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 GALMQ96C23 342 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 RAB40CQ96S21 281 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 SEC11CQ9BY50 192 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 FAM186AA6NE01 2351 aa14.96□□□□□ -0.01
HLA-DQB1-204ENST00000399084 UMAD1C9J7I0 102 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 WRBO00258 174 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 AGFG2O95081 481 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 C1orf185Q5T7R7 199 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FAM219AQ8IW50 185 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 IL1F10Q8WWZ1 152 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 LRRC46Q96FV0 321 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 LURAP1Q96LR2 239 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SFXN3Q9BWM7 321 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 WISP2O76076 250 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 BTN1A1Q13410 526 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 WDR82Q6UXN9 313 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SEM1Q6ZVN7 128 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SSX8Q7RTT4 187 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 MUCL1Q96DR8 90 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 OPN3Q9H1Y3 402 aaPredicted RBP14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 ZDHHC8Q9ULC8 765 aa14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RBM7Q9Y580 266 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-204ENST00000399084 H0YL77 283 aa14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FBXO24O75426 580 aa14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 TMEM252Q8N6L7 170 aa14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 GNPNAT1Q96EK6 184 aaPredicted RBP14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 TSNAXQ99598 290 aaKnown RBP14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 HRH4Q9H3N8 390 aa14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 UQCC1Q9NVA1 299 aa14.94□□□□□ -0.02
HLA-DQB1-204ENST00000399084 ESPL1Q14674 2120 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 IGHV3-13P01766 116 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CEACAM6P40199 344 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 LPAR6P43657 344 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FABP6P51161 128 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 DVL1P1P54792 670 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 TAS2R30P59541 319 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 POLR2GP62487 172 aaKnown RBP eCLIP14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RPL23AP62750 156 aaKnown RBP14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 DEFA5Q01523 94 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 IGFBP7Q16270 282 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 LFNGQ8NES3 379 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 PPP1R35Q8TAP8 253 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SMIM3Q9BZL3 60 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 NKX6-2Q9C056 277 aaPredicted RBP14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SMDT1Q9H4I9 107 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 COA4Q9NYJ1 87 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 WASF3Q9UPY6 502 aa14.93□□□□□ -0.02
HLA-DQB1-204ENST00000399084 A6NLC8 198 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 FAM90A26D6RGX4 464 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 ABCD4O14678 606 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 SNAPINO95295 136 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CRYAAP02489 173 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CD5P06127 495 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CEACAM8P31997 349 aaPredicted RBP14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 GLRXP35754 106 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RPS23P62266 143 aaKnown RBP14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 NHLH2Q02577 135 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 ZNF273Q14593 569 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 WFDC1Q9HC57 220 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 TREM1Q9NP99 234 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 OR1A1Q9P1Q5 309 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RNF115Q9Y4L5 304 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 WSB1Q9Y6I7 421 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 RNASEK-C17orf49H0YIS7 233 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 MKRN2OSH3BPM6 223 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 DFFBO76075 338 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 IGLV2-14P01704 120 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 IL2RGP31785 369 aa14.92□□□□□ -0.02
HLA-DQB1-204ENST00000399084 CXorf66Q5JRM2 361 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms