RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NKX2-6A6NCS4 301 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 TEX46H3BTG2 121 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 K7ENP7 123 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 TNFSF12O43508 249 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 IGHV3-13P01766 116 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 BMP5P22003 454 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 GLRXP35754 106 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 KLF3P57682 345 aaPredicted RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 RPS23P62266 143 aaKnown RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 NKX6-1P78426 367 aaPredicted RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 TESK1Q15569 626 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 Q8NA96 180 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 LILRB1Q8NHL6 650 aaPredicted RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 GPHA2Q96T91 129 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 OR2S2Q9NQN1 319 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 FBXL17Q9UF56 701 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 RCL1Q9Y2P8 373 aaKnown RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 A8MXE2 369 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 A8MXK9 166 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 IFNL4K9M1U5 179 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 FGF16O43320 207 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 GPR137BO60478 399 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 PTBP3O95758 552 aaKnown RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 WNT2P09544 360 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 F2RP25116 425 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 RPL7L1Q6DKI1 246 aaKnown RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 MRGPRGQ86SM5 289 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 LRP11Q86VZ4 500 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 DOLPP1Q86YN1 238 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
CBX3-202ENST00000396386 TMED6Q8WW62 240 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 KCNS2Q9ULS6 477 aa12.59□□□□□ -0.39
CBX3-202ENST00000396386 LOC400499M0QZD8 3231 aa12.58□□□□□ -0.39
CBX3-202ENST00000396386 HEATR1Q9H583 2144 aaKnown RBP12.58□□□□□ -0.4
CBX3-202ENST00000396386 ZSCAN5BA6NJL1 495 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 GAPDHP04406 335 aaKnown RBP12.58□□□□□ -0.4
CBX3-202ENST00000396386 P2RY1P47900 373 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 GFRALQ6UXV0 394 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 OR10Z1Q8NGY1 313 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 UBALD1Q8TB05 177 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 RNF141Q8WVD5 230 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 AKR1E2Q96JD6 320 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 ASF1BQ9NVP2 202 aa12.58□□□□□ -0.4
CBX3-202ENST00000396386 RBM7Q9Y580 266 aaKnown RBP12.58□□□□□ -0.4
CBX3-202ENST00000396386 CHD6Q8TD26 2715 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 OOEPA6NGQ2 149 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 KRBOX1C9JBD0 128 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 ATP6V1G2-DDX39BF2Z307 99 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 ADAM20O43506 726 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 VDAC1P21796 283 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 OR3A1P47881 315 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 GNMTQ14749 295 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 NMSQ5H8A3 153 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 GPR157Q5UAW9 335 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 EIF5AL1Q6IS14 154 aaKnown RBP12.57□□□□□ -0.4
CBX3-202ENST00000396386 COQ2Q96H96 371 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 A0A0G2JNJ9 132 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 CLEC18AA5D8T8 446 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 SRRM5B3KS81 715 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 CCKARP32238 428 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 NKX2-1P43699 371 aaPredicted RBP12.57□□□□□ -0.4
CBX3-202ENST00000396386 GABRA2P47869 451 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 TMEM33P57088 247 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 HOXA4Q00056 320 aaPredicted RBP12.57□□□□□ -0.4
CBX3-202ENST00000396386 COL10A1Q03692 680 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 FAM27E3Q08E93 113 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 VHLLQ6RSH7 139 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 FAM90A1Q86YD7 464 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 CLEC18CQ8NCF0 446 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 OR51H1Q8NH63 302 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 TMEM171Q8WVE6 324 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 LINC00052Q96N35 136 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 Q9UFV3 132 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 MSRB2Q9Y3D2 182 aa12.57□□□□□ -0.4
CBX3-202ENST00000396386 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 IGLV3-9A0A075B6K5 115 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 JTBO76095 146 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 HEXAP06865 529 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 EGR1P18146 543 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 PVALBP20472 110 aaPredicted RBP12.56□□□□□ -0.4
CBX3-202ENST00000396386 AESQ08117 197 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 DMBX1Q8NFW5 382 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 GALMQ96C23 342 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 MEGF10Q96KG7 1140 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 SMIM3Q9BZL3 60 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 LIN7CQ9NUP9 197 aaKnown RBP12.56□□□□□ -0.4
CBX3-202ENST00000396386 TAS2R3Q9NYW6 316 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 METRNQ9UJH8 293 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 ZDHHC8Q9ULC8 765 aa12.56□□□□□ -0.4
CBX3-202ENST00000396386 ZZEF1O43149 2961 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 TFF1P04155 84 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 SERPINE2P07093 398 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 IL2RGP31785 369 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 CEACAM6P40199 344 aa12.55□□□□□ -0.4
CBX3-202ENST00000396386 KRBOX4Q5JUW0 171 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms