RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RAB5CP51148 216 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 POLR2GP62487 172 aaKnown RBP eCLIP14.18□□□□□ -0.14
NUP50-202ENST00000396096 RTP5Q14D33 572 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 SWI5Q1ZZU3 235 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 CXorf67Q86X51 503 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 MBD3L2Q8NHZ7 208 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 STARD4Q96DR4 205 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 SLC25A31Q9H0C2 315 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 ZNF71Q9NQZ8 489 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 TINAGQ9UJW2 476 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 TRAPPC2LQ9UL33 140 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 PROCRQ9UNN8 238 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 IGSF23A1L1A6 192 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 F8W036 122 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 TNFSF12O43508 249 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 PITX3O75364 302 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 HEXAP06865 529 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 GRPP07492 148 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 ARHGDIBP52566 201 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 CXorf66Q5JRM2 361 aaPredicted RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 PUSL1Q8N0Z8 303 aaKnown RBP14.18□□□□□ -0.14
NUP50-202ENST00000396096 COMMD1Q8N668 190 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 IL1F10Q8WWZ1 152 aa14.18□□□□□ -0.14
NUP50-202ENST00000396096 A0A1B0GU03 582 aa14.17□□□□□ -0.14
NUP50-202ENST00000396096 FAM24AA6NFZ4 105 aa14.17□□□□□ -0.14
NUP50-202ENST00000396096 RNASEK-C17orf49H0YIS7 233 aa14.17□□□□□ -0.14
NUP50-202ENST00000396096 TCF15Q12870 199 aa14.17□□□□□ -0.14
NUP50-202ENST00000396096 MBNL2Q5VZF2 373 aaKnown RBP14.17□□□□□ -0.14
NUP50-202ENST00000396096 ZNF610Q8N9Z0 462 aa14.17□□□□□ -0.14
NUP50-202ENST00000396096 PRR7Q8TB68 274 aa14.17□□□□□ -0.14
NUP50-202ENST00000396096 STRAPQ9Y3F4 350 aaKnown RBP14.17□□□□□ -0.14
NUP50-202ENST00000396096 SSSCA1O60232 199 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 CEACAM1P13688 526 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 VAMP2P63027 116 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 ZNF266Q14584 549 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 GUCA2BQ16661 112 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 SEM1Q6ZVN7 128 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 TMEM252Q8N6L7 170 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 LSM10Q969L4 123 aaKnown RBP14.16□□□□□ -0.14
NUP50-202ENST00000396096 TMEM231Q9H6L2 316 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 LUZP4Q9P127 313 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 CACFD1Q9UGQ2 172 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 RNF115Q9Y4L5 304 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 EP300Q09472 2414 aaPredicted RBP14.16□□□□□ -0.14
NUP50-202ENST00000396096 TRAV39A0A0B4J263 110 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 IGHV2OR16-5A0A0B4J2B6 119 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 IGHV1-18A0A0C4DH31 117 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 FAM74A7A6NL05 159 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 SERPINE2P07093 398 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 BAXQ07812 192 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 ZNF718Q3SXZ3 478 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 FAM74A3Q4VXF1 159 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 SLC35E4Q6ICL7 350 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 Q6ZR03 302 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 BHLHA15Q7RTS1 189 aaPredicted RBP14.16□□□□□ -0.14
NUP50-202ENST00000396096 FAM96BQ9Y3D0 163 aa14.16□□□□□ -0.14
NUP50-202ENST00000396096 OR5H1A6NKK0 313 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 FAM157AC9JC47 383 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 PROB1E7EW31 1015 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 TIMM8AO60220 97 aaPredicted RBP14.15□□□□□ -0.14
NUP50-202ENST00000396096 PSG2P11465 335 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 CD200P41217 278 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 DVL1P1P54792 670 aaPredicted RBP14.15□□□□□ -0.14
NUP50-202ENST00000396096 ACP7Q6ZNF0 438 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 BEND4Q6ZU67 534 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 ODF3L1Q8IXM7 274 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 GPR146Q96CH1 333 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 TOLLIPQ9H0E2 274 aa14.15□□□□□ -0.14
NUP50-202ENST00000396096 OPN3Q9H1Y3 402 aaPredicted RBP14.15□□□□□ -0.14
NUP50-202ENST00000396096 URB1O60287 2271 aaKnown RBP14.15□□□□□ -0.14
NUP50-202ENST00000396096 A0A0G2JRQ6 117 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 KIAA1324LA8MWY0 1029 aaPredicted RBP14.14□□□□□ -0.15
NUP50-202ENST00000396096 TRIM77I1YAP6 450 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 NUPL2O15504 423 aaKnown RBP14.14□□□□□ -0.15
NUP50-202ENST00000396096 PSPNO60542 156 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 TMEM50AO95807 157 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 OR8U9P0C7N5 309 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 WDR82Q6UXN9 313 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 Q6ZS92 163 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 OR8U1Q8NH10 309 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 OR51H1Q8NH63 302 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 MAGT1Q9H0U3 335 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 SLC25A15Q9Y619 301 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 TM4SF5O14894 197 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 HSPA12AO43301 675 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 SNAPINO95295 136 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 IGKV1-39P01597 117 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 IGKV1D-39P04432 117 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 ATF4P18848 351 aaPredicted RBP14.14□□□□□ -0.15
NUP50-202ENST00000396096 GCH1P30793 250 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 ID4P47928 161 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 PAX9P55771 341 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 EIF2S3LQ2VIR3 472 aaKnown RBP14.14□□□□□ -0.15
NUP50-202ENST00000396096 ZNF826PQ6ZT77 177 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 SH3BGRL3Q9H299 93 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 LIN7CQ9NUP9 197 aaKnown RBP14.14□□□□□ -0.15
NUP50-202ENST00000396096 OR14J1Q9UGF5 321 aa14.14□□□□□ -0.15
NUP50-202ENST00000396096 INTS1Q8N201 2190 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms