RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NCR3LG1Q68D85 454 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 C20orf204Q6ZNR8 217 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ADPRHL1Q8NDY3 354 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 HLA-CQ95604 372 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ZNF845Q96IR2 970 aaPredicted RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 CHCHD2Q9Y6H1 151 aaPredicted RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 A0A1B0GW64 132 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 LRRC3CA6NJW4 275 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 HNF1AP20823 631 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 CTSSP25774 331 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 OTX1P32242 354 aaPredicted RBP12.25□□□□□ -0.45
CLIP2-203ENST00000395060 CHRNA7P36544 502 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 FIP1L1Q6UN15 594 aaKnown RBP12.25□□□□□ -0.45
CLIP2-203ENST00000395060 OR56B2PQ8NGI1 322 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 LHX4Q969G2 390 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 SDF2L1Q9HCN8 221 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 ZNF816-ZNF321PA0A0X1KG74 233 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 MAP1LC3B2A6NCE7 125 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 SYNGR3O43761 229 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 CXCL13O43927 109 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 SCGB1D1O95968 90 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 GNB2P62879 340 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 DAZAP2Q15038 168 aaPredicted RBP12.25□□□□□ -0.45
CLIP2-203ENST00000395060 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 MAP1LC3BQ9GZQ8 125 aa12.25□□□□□ -0.45
CLIP2-203ENST00000395060 MRPS17Q9Y2R5 130 aaKnown RBP12.25□□□□□ -0.45
CLIP2-203ENST00000395060 ZNF737O75373 536 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 ID3Q02535 119 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 WDR5BQ86VZ2 330 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 PSENENQ9NZ42 101 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 PITPNC1Q9UKF7 332 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 WDR1O75083 606 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 PGLYRP1O75594 196 aaPredicted RBP12.24□□□□□ -0.45
CLIP2-203ENST00000395060 FGF7P21781 194 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 H3F3AP84243 136 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 SRYQ05066 204 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 GUSBP11Q6P575 273 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 CADM4Q8NFZ8 388 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 OR1P1Q8NH06 330 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 OR1A1Q9P1Q5 309 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 NCOR1O75376 2440 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 A0A0G2JMM0 328 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 A0A1W2PPB8 328 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 A0A1W2PRS3 328 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 KIR3DP1A8MWS1 328 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 PPP5D1E7EU14 171 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 GLB1P16278 677 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 CRYGSP22914 178 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 WNT5AP41221 380 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 GALR1P47211 349 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 CST9LP1Q5W188 147 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 SMDT1Q9H4I9 107 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 UCK1Q9HA47 277 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 SLC39A9Q9NUM3 307 aa12.24□□□□□ -0.45
CLIP2-203ENST00000395060 DNAJC13O75165 2243 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 A8MWP6 167 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 KIAA1324LA8MWY0 1029 aaPredicted RBP12.23□□□□□ -0.45
CLIP2-203ENST00000395060 H7BYZ3 331 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 SYNGR1O43759 233 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 FUT6P51993 359 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 EIF3IQ13347 325 aaKnown RBP12.23□□□□□ -0.45
CLIP2-203ENST00000395060 RAB35Q15286 201 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 BATFQ16520 125 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 FAM27BQ5VT28 67 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 AAED1Q7RTV5 226 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 TMEM183AQ8IXX5 376 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 ZNF295-AS1Q8N0V1 137 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 OR4F5Q8NH21 305 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 ABHD3Q8WU67 409 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 TMEM54Q969K7 222 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 TMEM56Q96MV1 263 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 OR4F4Q96R69 305 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 DSPP15924 2871 aaKnown RBP12.23□□□□□ -0.45
CLIP2-203ENST00000395060 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 C10orf128Q5T292 105 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 TMEM204Q9BSN7 226 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 PRSS50Q9UI38 385 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 RNF115Q9Y4L5 304 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 DOCK10Q96BY6 2186 aa12.23□□□□□ -0.45
CLIP2-203ENST00000395060 TP53I11O14683 189 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 ZIC3O60481 467 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 CRYAAP02489 173 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 FAM53AQ6NSI3 398 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-203ENST00000395060 OR10V1Q8NGI7 309 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 CD300LBA8K4G0 201 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 TUSC2O75896 110 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 IL18BPO95998 194 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 IGKV1D-33P01593 117 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 IGKV1-33P01594 117 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 UCP3P55916 312 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 UBE2G2P60604 165 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 SRPXP78539 464 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 IL24Q13007 206 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms