RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SPACA3Q8IXA5 215 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 PLPPR1Q8TBJ4 325 aa13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 FGF23Q9GZV9 251 aaPredicted RBP13.51□□□□□ -0.25
SMARCD1-202ENST00000394963 CCDC168Q8NDH2 2452 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 DTYMKP23919 212 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 STARD4Q96DR4 205 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 PLK3Q9H4B4 646 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 RFNGQ9Y644 331 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 H7C2Y5 167 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 SPINT2O43291 252 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 TXNL1O43396 289 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 TNFSF4P23510 183 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 PRSS54Q6PEW0 395 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 FOXL2NBQ6ZUU3 175 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 RNF141Q8WVD5 230 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 TLN2Q9Y4G6 2542 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 TRAV24A0A0B4J272 114 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 RNF222A6NCQ9 220 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 CHST1O43916 411 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 MBPP02686 304 aaPredicted RBP13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 C1orf185Q5T7R7 199 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 PLEKHF2Q9H8W4 249 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 GLRX2Q9NS18 164 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 SLC2A8Q9NY64 477 aa13.5□□□□□ -0.25
SMARCD1-202ENST00000394963 TPPPO94811 219 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 NKX6-1P78426 367 aaPredicted RBP13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 RUNX1Q01196 453 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 LYPD6Q86Y78 171 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 STX12Q86Y82 276 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 CNTNAP3BQ96NU0 1288 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 CNTNAP3Q9BZ76 1288 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 Q9N2K0 584 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 CPAMD8Q8IZJ3 1885 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 PSPNO60542 156 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 IFNA5P01569 189 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 CBR1P16152 277 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 RBPJQ06330 500 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 SPAG16Q8N0X2 631 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 OR5C1Q8NGR4 320 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 OR2G3Q8NGZ4 309 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 ERGIC1Q969X5 290 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 CCL13Q99616 98 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 IGHV2OR16-5A0A0B4J2B6 119 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 VSTM5A8MXK1 200 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 FCGR3BO75015 233 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 OR13C7P0DN81 318 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 G6PCP35575 357 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 OR8G5Q8NG78 346 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 PPP1R35Q8TAP8 253 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 LINC01560Q8TB33 94 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 CXXC4Q9H2H0 198 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 KIAA1549Q9HCM3 1950 aa13.49□□□□□ -0.25
SMARCD1-202ENST00000394963 TMEM30CPA0ZSE6 113 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 M0R1X1 148 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 NAAAQ02083 359 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 MPV17LQ2QL34 196 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 PRR7Q8TB68 274 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 AMDHD2Q9Y303 409 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 LRP5LA4QPB2 252 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 GYPAP02724 150 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 VKORC1L1Q8N0U8 176 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 SFT2D1Q8WV19 159 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 OPA3Q9H6K4 179 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 ZNF107Q9UII5 783 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 HSF4Q9ULV5 492 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 ARHGAP21Q5T5U3 1957 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 LRRK2Q5S007 2527 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 AQP7O14520 342 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 GPR37O15354 613 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 PTBP3O95758 552 aaKnown RBP13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 LPAR6P43657 344 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 GPR12P47775 334 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 ERVFRD-1P60508 538 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 HAGHQ16775 308 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 FAHD2BQ6P2I3 314 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 THNSL2Q86YJ6 484 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 FAHD2AQ96GK7 314 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 CLCC1Q96S66 551 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 OR2W1Q9Y3N9 320 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
SMARCD1-202ENST00000394963 RELNP78509 3460 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 TNCP24821 2201 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 IGHV1-18A0A0C4DH31 117 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 A0A1W2PRD5 423 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 A0A1W2PRF3 423 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 A0A1W2PRM7 423 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 CRYM-AS1A6NIL9 109 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 REG1BP48304 166 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 OR2B8PP59922 312 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 HLA-DRB3P79483 266 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 LCN15Q6UWW0 184 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 LYG1Q8N1E2 194 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 SNRNP40Q96DI7 357 aaKnown RBP13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 CLCF1Q9UBD9 225 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 E5RGE8 158 aa13.47□□□□□ -0.25
SMARCD1-202ENST00000394963 DLL1O00548 723 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms